Job Description P77348 Confidence 79.93% Date Thu Jan 5 12:28:03 GMT 2012 Rank 31 Aligned Residues 64 % Identity 13% Template c3ombA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:extracellular solute-binding protein, family 1; PDBTitle: crystal structure of extracellular solute-binding protein from2 bifidobacterium longum subsp. infantis Resolution 2.10 Å

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		374	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.					.	.	.	.		.	430	.	.	.	.	.	.	.
Predicted Secondary structure																																																					.	.	.	.					.
Query SS confidence																																																					.	.	.	.					.
Query Sequence		G	P	Q	K	P	L	K	L	T	L	L	Y	N	T	S	E	N	H	Q	K	I	A	I	A	V	A	S	M	W	K	K	N	L	G	V	D	V	K	L	Q	N	Q	E	W	K	T	Y	I	D	S	R	.	.	.	.	N	T	G	N	.	F	D	V	I	R	A	S	W	V
Query Conservation																																																					.	.	.	.					.
Alig confidence																																																					.	.	.	.					.
Template Conservation
Template Sequence		A	D	G	K	P	I	V	T	V	L	V	K	K	N	A	N	Q	E	K	X	A	N	X	Q	W	A	K	D	L	E	A	D	C	D	C	K	I	E	W	Q	E	V	T	R	E	A	W	A	Q	Q	K	N	A	T	L	A	S	G	D	I	A	D	V	N	L	N	G	Y	G
Template Known Secondary structure		T	T			B										T	T	B			G	G	G												T	S																							T				S				S	S
Template Predicted Secondary structure
Template SS confidence
		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions