Job Description P77348 Confidence 24.60% Date Thu Jan 5 12:28:03 GMT 2012 Rank 71 Aligned Residues 74 % Identity 12% Template c2v25B_ PDB info PDB header:receptor Chain: B: PDB Molecule:major cell-binding factor; PDBTitle: structure of the campylobacter jejuni antigen peb1a, an2 aspartate and glutamate receptor with bound aspartate Resolution 1.49 Å

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		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	K	V	T	F	L	P	I	N	Q	E	S	A	A	T	K	R	Y	L	A	G	D	I	D	I	T	E	S	F	P	K	N	M	Y	Q	K	L	L	K	D	I	P	G	Q	V	Y	T	P	P	Q	L	G	T	Y	Y	Y	A	F	N	T	Q	K	G	P	T	A	D	Q	R	V	R	L	A	L	S	M	T	I	D	R
Query Conservation
Alig confidence																										.																																					.	.	.	.	.
Template Conservation																										.																																					.	.	.	.	.
Template Sequence		I	D	V	K	F	S	E	F	P	D	Y	P	S	I	K	A	A	L	D	A	K	R	V	D	.	A	F	S	V	D	K	S	I	L	L	G	Y	V	D	D	K	S	E	I	L	P	D	S	F	E	P	Q	S	Y	G	I	V	T	K	K	D	.	.	.	.	.	D	P	A	F	A	K	Y	V	D	D	F	V	K	E
Template Known Secondary structure										S	S										T	T	S	S	S	.										T	T	T			T	T					S				S										T	T	.	.	.	.	.
Template Predicted Secondary structure																										.																																					.	.	.	.	.
Template SS confidence
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.						.	.	.	.	210	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions