Job Description P77348 Confidence 56.74% Date Thu Jan 5 12:28:03 GMT 2012 Rank 40 Aligned Residues 43 % Identity 14% Template c2rc9A_ PDB info PDB header:membrane protein Chain: A: PDB Molecule:glutamate [nmda] receptor subunit 3a; PDBTitle: crystal structure of the nr3a ligand binding core complex with acpc at2 1.96 angstrom resolution Resolution 1.96 Å

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		395	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.												.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.
Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																								.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	I	A	V	A	S	M	W	K	K	N	L	G	V	D	V	K	L	Q	N	Q	E	.	.	.	.	.	.	.	.	.	.	.	W	K	T	Y	I	D	S	R	N	T	G	N	F	D	V	I	R	A	S	W	V
Query Conservation																								.	.	.	.	.	.	.	.	.	.	.
Alig confidence																								.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		C	I	D	L	L	E	Q	L	A	E	D	M	N	F	D	F	D	L	Y	I	V	G	D	G	K	Y	G	A	W	K	N	G	H	W	T	G	L	V	G	D	L	L	S	G	T	A	N	M	A	V	T	S	F	S
Template Known Secondary structure														T									T	T								T	T												T	S		S				S	S		B
Template Predicted Secondary structure
Template SS confidence
		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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