 |
Job Description | P24255 | Confidence | 64.47% | Date | Thu Jan 5 11:41:39 GMT 2012 |
Rank | 384 | Aligned Residues | 44 |
% Identity | 14% | Template | d1z0xa1 |
SCOP info | DNA/RNA-binding 3-helical bundle
| Homeodomain-like
| Tetracyclin repressor-like, N-terminal domain
|
Resolution | 2.40 |
|
  |   |
336 | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | |
. | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| . |
|  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
R | N | D | T | L | L | R | V | S | R | C | I | V | E | Q | Q | Q | A | F | F | E | Q | . |
G | E | E | Y | M | K | P | M | V | L | A | D | I | A | Q | A | V | E | M | H | E | S | T | I | S | R | V | T | T | Q | K |
Query Conservation |   |
|   |   |
|
|
|
|
|   |   |   |
|
|   |   |
|   |   |
|
|   |   | . |
|   |   |   |
|
|
|
|
|
|
|
|
|
|   |   |
|
|
|
|
|
|
|
|
|
|
|
|   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
| . |
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |   |
|   |   |
|
|   |   |
|   |   |
| . | . | . | . | . | . |   |   |
| . | . | . |   |   |   |   |
|   |   |   |
|
|   |   |
|
|
|
|   |   |
|   |
|   |
|
|   |
|
|
Template Sequence |   |
S | K | D | T | I | I | A | A | A | F | S | L | L | E | K | . |
. |
. |
. |
. |
. |
S | P | T | . |
. |
. |
L | E | Q | L | S | X | R | K | V | A | K | Q | L | G | V | Q | A | P | A | I | Y | W | Y | F | K | N | K |
Template Known Secondary structure |   |
S |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | S |
|
| . | . | . | G | G | G |
|
|  |  |  |  |  |  |  |  | T | S |
|  |  |  |  |  | T | T |
| S | S |  |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . |  |
|
| . | . | . |  |  |  |
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
6 | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | |
|
|
|
|
|
. | . | . | |
|
|
. | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|