Job Description P24255 Confidence 57.35% Date Thu Jan 5 11:41:39 GMT 2012 Rank 436 Aligned Residues 78 % Identity 21% Template d1sd4a_ SCOP info DNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain Penicillinase repressor Resolution 2.00

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		363	.	.	.	.	.	.	370	.	.	.	.					.	.	.	.	.	380	.	.					.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.
Predicted Secondary structure														.	.	.	.									.	.	.	.																																																		.	.	.
Query SS confidence														.	.	.	.									.	.	.	.																																																		.	.	.
Query Sequence		K	P	M	V	L	A	D	I	A	Q	A	V	.	.	.	.	E	M	H	E	S	T	I	S	.	.	.	.	R	V	T	T	Q	K	Y	L	H	S	P	R	G	I	F	E	L	K	Y	F	F	S	S	H	V	N	T	E	G	G	G	E	A	S	S	T	A	I	R	A	L	V	K	K	L	I	A	A	E	.	.	.
Query Conservation														.	.	.	.									.	.	.	.																																																		.	.	.
Alig confidence														.	.	.	.									.	.	.	.													.	.														.	.	.																				.	.	.
Template Conservation																																										.	.														.	.	.
Template Sequence		K	S	V	S	A	N	E	I	V	V	E	I	Q	K	Y	K	E	V	S	D	K	T	I	R	T	L	I	T	R	L	Y	K	K	E	I	I	K	R	Y	K	.	.	S	E	N	I	Y	F	Y	S	S	N	I	K	E	.	.	.	D	D	I	K	X	K	T	A	K	T	F	L	N	K	L	Y	G	G	D	X	K	S
Template Known Secondary structure		S	S												T	T	S																	T	T	S						.	.		T	T								S			.	.	.																	T	T
Template Predicted Secondary structure																																										.	.														.	.	.
Template SS confidence
		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.			.	.	.	.	.	.	.	70	.	.	.	.	.				.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
							432	.	.	.	.	.	.	.	440	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.
Query SS confidence		.	.	.	.	.
Query Sequence		.	.	.	.	.	N	P	A	K	P	L	S	D	S	K	L	T	S	L
Query Conservation		.	.	.	.	.
Alig confidence		.	.	.	.	.
Template Conservation
Template Sequence		L	V	L	N	F	A	K	N	E	E	L	N	N	K	E	I	E	E	L
Template Known Secondary structure									T	T		S
Template Predicted Secondary structure
Template SS confidence
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions