Job Description P24255 Confidence 94.43% Date Thu Jan 5 11:41:39 GMT 2012 Rank 20 Aligned Residues 83 % Identity 10% Template c6paxA_ PDB info PDB header:gene regulation/dna Chain: A: PDB Molecule:homeobox protein pax-6; PDBTitle: crystal structure of the human pax-6 paired domain-dna2 complex reveals a general model for pax protein-dna3 interactions Resolution 2.50 Å

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		365	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	V	L	A	D	I	A	Q	A	V	E	M	H	E	S	T	I	S	R	V	T	T	Q	K	Y	L	H	S	P	R	G	I	F	E	L	K	Y	F	F	S	S	H	V	N	T	E	G	G	G	E	A	S	S	T	A	I	R	A	L	V	K	K	L	I	A	A	E	N	P	A	K	P	L	S	D	S	K	L	T	S
Query Conservation
Alig confidence																									.	.	.	.	.	.	.	.	.																																		.					.	.
Template Conservation																									.	.	.	.	.	.	.	.	.																																		.					.	.
Template Sequence		A	R	P	C	D	I	S	R	I	L	Q	V	S	N	G	C	V	S	K	I	L	G	R	.	.	.	.	.	.	.	.	.	Y	Y	A	T	G	S	I	R	P	R	A	I	G	G	S	K	P	R	V	A	T	P	E	V	V	S	K	I	A	Q	Y	K	Q	.	E	C	P	S	.	.	I	F	A	W	E	I	R	D
Template Known Secondary structure												T													.	.	.	.	.	.	.	.	.					S			S					S					S	S	S														.			T	T	.	.
Template Predicted Secondary structure																									.	.	.	.	.	.	.	.	.																																		.					.	.
Template SS confidence
		34	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.										.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.		90	.	.	.			.	.	.	.	.	.	100	.
		445	.	.	.	.	450	.						.	.	.	.	.	.	.	.
Predicted Secondary structure									.	.	.	.	.
Query SS confidence									.	.	.	.	.
Query Sequence		L	L	S	E	Q	G	I	.	.	.	.	.	M	V	A	R	R	T	V	A
Query Conservation									.	.	.	.	.
Alig confidence									.	.	.	.	.
Template Conservation
Template Sequence		R	L	L	S	E	G	V	C	T	N	D	N	I	P	S	V	S	S	I	N
Template Known Secondary structure						T	T	S	S		T	T	T
Template Predicted Secondary structure
Template SS confidence
		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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