 |
Job Description | P24255 | Confidence | 85.73% | Date | Thu Jan 5 11:41:39 GMT 2012 |
Rank | 126 | Aligned Residues | 48 |
% Identity | 15% | Template | c3v4gA_ |
PDB info |
PDB header:dna binding protein | Chain: A: PDB Molecule:arginine repressor; |
PDBTitle: 1.60 angstrom resolution crystal structure of an arginine repressor2 from vibrio vulnificus cmcp6
|
Resolution | 1.60 Å |
|
  |   |
417 | . | . | 420 | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . | . | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | |
. | . | . | . | . | . | . | . | 460 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
| . |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
S | T | A | I | R | A | L | V | K | K | L | I | A | A | E | N | P | A | K | P | L | S | D | S | K | L | T | S | L | L | S | E | Q | G | I | . |
M | V | A | R | R | T | V | A | K | Y | R | E | S | L | S | I |
Query Conservation |   |
  |   |   |
|
|   |   |
|
|   |
|
|   |   |
|
|   |   |
|
|
|
|
|   |   |
|   |   |   |
|   |   |   |
|
| . |   |
|
|
|
|
|
|
|
|
|
|
|   |
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |
|
|   |   |
|   |   |
|
|   |   |   |   |
|   | . | . | . |
|
|
|
|
|   |   |   |
|   |   |   |
|   |   |   |
|
|
|
|
|
|
|
|
|
|
|
|
|   |
|
Template Sequence |   |
Q | D | N | L | V | R | A | F | K | A | L | L | K | E | E | R | F | G | . |
. |
. |
S | Q | G | E | I | V | E | A | L | K | Q | E | G | F | E | N | I | N | Q | S | K | V | S | R | M | L | T | K | F | G | A |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
|
|
| . | . | . | S |  |  |  |  |  |  |  |  |  |  | T | T |
| T | T |
|
|  |  |  |  |  |  |  |  |  |  | T | T |
|
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
| . | . | . |
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
7 | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | |
|
|
. | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|