Job Description P24255 Confidence 81.69% Date Thu Jan 5 11:41:39 GMT 2012 Rank 197 Aligned Residues 87 % Identity 15% Template c3gbgA_ PDB info PDB header:transcription regulator Chain: A: PDB Molecule:tcp pilus virulence regulatory protein; PDBTitle: crystal structure of toxt from vibrio cholerae o395 Resolution 1.90 Å

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		363	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	P	M	V	L	A	D	I	A	Q	A	V	E	M	H	E	S	T	I	S	R	V	T	T	Q	K	Y	L	H	S	P	R	G	I	F	E	L	K	Y	F	F	S	S	H	V	N	T	E	G	G	G	E	A	S	S	T	A	I	R	A	L	V	K	K	L	I	A	A	E	N	P	A	K	P	L	S	D	S	K	L
Query Conservation
Alig confidence																										.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.	.	.
Template Conservation																										.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.	.	.
Template Sequence		R	N	W	R	W	A	D	I	C	G	E	L	R	T	N	R	M	I	L	K	K	E	L	E	.	.	.	.	.	.	S	R	G	V	K	F	R	E	L	I	N	S	I	R	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	Y	S	I	S	L	M	K	T	.	.	.	.	.	.	.	G	E	F	K	I
Template Known Secondary structure		S												T												.	.	.	.	.	.	T	T	T													.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.	.	.	T
Template Predicted Secondary structure																										.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.	.	.
Template SS confidence
		184	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.							.	.	210	.	.	.	.	.	.	.	.	.	220	.	.															.	.	.	.	.	.	.	230	.								.	.	.	.	.
		443	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	S	L	L	S	E	Q	G	I	M	V	A	R	R	T	V	A	K	Y	R	E	S	L	S	I	P	P	S	N	Q	R	K	Q	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	Q	I	A	Y	Q	S	G	F	A	S	V	S	Y	F	S	T	V	F	K	S	T	M	N	V	A	P	S	E	Y	L	F	M	L
Template Known Secondary structure								T	T		S														S	S									T
Template Predicted Secondary structure
Template SS confidence
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions