Return to main results Retrieve Phyre Job Id

Job DescriptionP24255
Confidence92.83%DateThu Jan 5 11:41:39 GMT 2012
Rank25Aligned Residues74
% Identity19%Templatec3e6dA_
PDB info PDB header:transcription regulationChain: A: PDB Molecule:cyclic nucleotide-binding protein; PDBTitle: crystal structure of cprk c200s
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   313......320.........330...... ...340.........350.........360.........370.........380...
Predicted Secondary structure  .........












Query SS confidence 























. . . . . . . . .














































Query Sequence  DGDSQFIRSNLQDAKWLIKSLESR. . . . . . . . . NDTLLRVSRCIVEQQQAFFEQGEEYMKPMVLADIAQAVEMHESTISR
Query Conservation       


 
   
  

 

 

.........  




   

  
  

  
   









  









Alig confidence 























.........














































Template Conservation       
          
                          
                 

   

  

 

 



Template Sequence  KSLRTVFRTDEDMIFEIFKNYLTKVAYYARQVPTIRILRLFYELCSSQGKRVGDTYEITMPLSQKSIGEITGVHHVTVSR
Template Known Secondary structure 
T


TT






Template Predicted Secondary structure 












Template SS confidence 















































































   110.........120.........130.........140.........150.........160.........170.........180.........
 
   384..
Predicted Secondary structure 
Query SS confidence 


Query Sequence  VTT
Query Conservation 

 
Alig confidence 


Template Conservation   
 
Template Sequence  VLA
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 


   197..
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions