Job Description P24255 Confidence 88.30% Date Thu Jan 5 11:41:39 GMT 2012 Rank 71 Aligned Residues 75 % Identity 12% Template c2k27A_ PDB info PDB header:transcription regulator Chain: A: PDB Molecule:paired box protein pax-8; PDBTitle: solution structure of human pax8 paired box domain Resolution UNK

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		365	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	V	L	A	D	I	A	Q	A	V	E	M	H	E	S	T	I	S	R	V	T	T	Q	K	Y	L	H	S	P	R	G	I	F	E	L	K	Y	F	F	S	S	H	V	N	T	E	G	G	G	E	A	S	S	T	A	I	R	A	L	V	K	K	L	I	A	A	E	N	P	A	K	P	L	S	D	S	K	L	T	S
Query Conservation
Alig confidence																							.									.	.	.	.	.	.	.	.																												.					.	.
Template Conservation																							.									.	.	.	.	.	.	.	.																												.					.	.
Template Sequence		V	R	P	C	D	I	S	R	Q	L	R	V	S	H	G	C	V	S	K	I	L	.	G	R	Y	Y	E	T	G	S	.	.	.	.	.	.	.	.	I	R	P	G	V	I	G	G	S	K	P	K	V	A	T	P	K	V	V	E	K	I	G	D	Y	K	R	.	Q	N	P	T	.	.	M	F	A	W	E	I	R	D
Template Known Secondary structure												T			S								.			S	S	T	T	S		.	.	.	.	.	.	.	.																T	T											.			S	S	.	.	S
Template Predicted Secondary structure																							.									.	.	.	.	.	.	.	.																												.					.	.
Template SS confidence
		42	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.		.	.	.	.	.	.	.	70									.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.		.	.	100	.			.	.	.	.	.	.	.	.
		445	.	.	.	.	450	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	S	E	Q	G	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	L	L	A	E	G	V
Template Known Secondary structure							T
Template Predicted Secondary structure
Template SS confidence
		110	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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