Job Description P24255 Confidence 88.11% Date Thu Jan 5 11:41:39 GMT 2012 Rank 74 Aligned Residues 87 % Identity 13% Template c1zreB_ PDB info PDB header:gene regulation/dna Chain: B: PDB Molecule:catabolite gene activator; PDBTitle: 4 crystal structures of cap-dna with all base-pair2 substitutions at position 6, cap-[6g;17c]icap38 dna Resolution 2.80 Å

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		297	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.								.	.	.	.	360	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																													.	.	.	.	.	.	.
Query SS confidence																																																													.	.	.	.	.	.	.
Query Sequence		L	Q	I	N	Q	H	Y	A	S	M	C	N	N	A	R	N	D	G	D	S	Q	F	I	R	S	N	L	Q	D	A	K	W	L	I	K	S	L	E	S	R	N	D	T	L	L	R	V	S	R	C	I	V	E	Q	Q	Q	A	F	F	.	.	.	.	.	.	.	E	Q	G	E	E	Y	M	K	P	M	V	L	A	D
Query Conservation																																																													.	.	.	.	.	.	.
Alig confidence																												.	.	.																															.	.	.	.	.	.	.
Template Conservation																												.	.	.
Template Sequence		A	E	I	S	Y	K	K	F	R	Q	L	I	Q	V	N	P	D	I	L	M	R	L	S	A	Q	M	.	.	.	A	R	R	L	Q	V	T	S	E	K	V	G	N	L	A	F	L	D	V	T	G	R	I	A	Q	T	L	L	N	L	A	K	Q	P	D	A	M	T	H	P	D	G	M	Q	I	K	I	T	R	Q	E
Template Known Secondary structure																	T											.	.	.																															T	T	S	T	T					T	T
Template Predicted Secondary structure																												.	.	.
Template SS confidence
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120				.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
		370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	A	Q	A	V	E	M	H	E	S	T	I	S	R	V	T	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	G	Q	I	V	G	C	S	R	E	T	V	G	R	I	L	K
Template Known Secondary structure							T	S
Template Predicted Secondary structure
Template SS confidence
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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