Job Description P24255 Confidence 94.76% Date Thu Jan 5 11:41:39 GMT 2012 Rank 19 Aligned Residues 113 % Identity 23% Template c1r71B_ PDB info PDB header:transcription/dna Chain: B: PDB Molecule:transcriptional repressor protein korb; PDBTitle: crystal structure of the dna binding domain of korb in2 complex with the operator dna Resolution 2.20 Å

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		325	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	A	K	W	L	I	K	S	L	E	S	R	N	D	T	L	L	R	V	S	R	C	I	V	E	Q	Q	Q	A	F	F	E	Q	G	E	E	Y	M	K	P	M	V	L	A	D	I	A	Q	A	V	E	M	H	E	S	T	I	S	R	V	T	T	Q	K	Y	L	H	S	P	R	G	I	F	E	L	K	Y	F	F	S
Query Conservation
Alig confidence																														.	.	.	.	.	.	.	.	.	.																										.	.											.	.	.	.	.
Template Conservation																														.	.	.	.	.	.	.	.	.	.																										.	.											.	.	.	.	.
Template Sequence		E	A	D	Q	V	I	E	N	L	Q	R	N	E	L	T	P	R	E	I	A	D	F	I	G	R	E	L	A	.	.	.	.	.	.	.	.	.	.	K	G	K	K	K	G	D	I	A	K	E	I	G	K	S	P	A	F	I	T	Q	H	V	T	L	.	.	L	D	L	P	E	K	I	A	D	A	.	.	.	.	.
Template Known Secondary structure												T	T																	.	.	.	.	.	.	.	.	.	.	T	T										T	T											G	G	.	.	G	S									.	.	.	.	.
Template Predicted Secondary structure																														.	.	.	.	.	.	.	.	.	.																										.	.											.	.	.	.	.
Template SS confidence
		139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.											.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.			.	.	.	.	.	.	.	.	200	.
		405	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	H	V	N	T	E	G	G	G	E	A	S	S	T	A	I	R	A	L	V	K	K	L	I	A	A	E	N	P	A	K	P	L	S	D	S	K	L	T	S	L	L	S	E	Q	G	I	M	V	A	R	R	T	V	A	K	Y	R	E	S	L	S
Query Conservation
Alig confidence		.	.				.	.	.																			.	.	.	.	.	.	.
Template Conservation		.	.				.	.	.																			.	.	.	.	.	.	.
Template Sequence		.	.	F	N	T	.	.	.	G	R	V	R	D	V	T	V	V	N	E	L	V	T	A	F	K	K	.	.	.	.	.	.	.	R	P	E	E	V	E	A	W	L	D	D	D	T	Q	E	I	T	R	G	T	V	K	L	L	R	E	F	L	D
Template Known Secondary structure		.	.			T	.	.	.	T	S																	.	.	.	.	.	.	.												T	T				S
Template Predicted Secondary structure		.	.				.	.	.																			.	.	.	.	.	.	.
Template SS confidence
				202	.	.				.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.								.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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