Job Description P24255 Confidence 89.85% Date Thu Jan 5 11:41:39 GMT 2012 Rank 52 Aligned Residues 77 % Identity 9% Template c1iufA_ PDB info PDB header:dna binding protein Chain: A: PDB Molecule:centromere abp1 protein; PDBTitle: low resolution solution structure of the two dna-binding2 domains in schizosaccharomyces pombe abp1 protein Resolution UNK

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		364	.	.	.	.	.	370	.	.	.	.							.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.		410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.
Predicted Secondary structure													.	.	.	.	.	.																																				.
Query SS confidence													.	.	.	.	.	.																																				.
Query Sequence		P	M	V	L	A	D	I	A	Q	A	V	.	.	.	.	.	.	E	M	H	E	S	T	I	S	R	V	T	T	Q	K	Y	L	H	S	P	R	G	I	F	E	L	K	Y	F	F	S	S	H	V	N	T	.	E	G	G	G	E	A	S	S	T	A	I	R	A	L	V	K	K	L	I	A	A	E	N	P	A	K	P
Query Conservation													.	.	.	.	.	.																																				.
Alig confidence													.	.	.	.	.	.																.	.	.	.	.	.	.	.													.
Template Conservation																																		.	.	.	.	.	.	.	.
Template Sequence		R	S	G	Q	Q	D	L	I	E	W	F	R	E	K	F	G	K	D	I	S	Q	P	S	V	S	Q	I	L	S	S	K	Y	.	.	.	.	.	.	.	.	S	Y	L	D	N	T	V	E	K	P	W	D	V	K	R	N	R	P	P	K	Y	P	L	L	E	A	A	L	F	E	W	Q	V	Q	Q	G	D	D	A	T
Template Known Secondary structure																	S	S			S	S	S	S	T	T								.	.	.	.	.	.	.	.			T	T	T	S		S	S	S	S	S	S	S						S															T		T	T
Template Predicted Secondary structure																																		.	.	.	.	.	.	.	.
Template SS confidence
		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.									.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
		437	.	.	440	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	S	D	S	K	L	T	S	L	L	S	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	S	G	E	T	I	K	R	A	A	A	I
Template Known Secondary structure			S	S
Template Predicted Secondary structure
Template SS confidence
		99	100	.	.	.	.	.	.	.	.	.	110

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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