Job Description P24255 Confidence 62.72% Date Thu Jan 5 11:41:39 GMT 2012 Rank 399 Aligned Residues 103 % Identity 12% Template c1d5yD_ PDB info PDB header:transcription/dna Chain: D: PDB Molecule:rob transcription factor; PDBTitle: crystal structure of the e. coli rob transcription factor2 in complex with dna Resolution 2.70 Å

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		345	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	C	I	V	E	Q	Q	Q	A	F	F	E	Q	G	E	E	Y	M	K	P	M	V	L	A	D	I	A	Q	A	V	E	M	H	E	S	T	I	S	R	V	T	T	Q	K	Y	L	H	S	P	R	G	I	F	E	L	K	Y	F	F	S	S	H	V	N	T	E	G	G	G	E	A	S	S	T	A	I	R	A	L	V
Query Conservation
Alig confidence																		.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																		.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	G	I	I	R	D	L	L	I	W	L	E	G	H	L	D	.	.	Q	P	L	S	L	D	N	V	A	A	K	A	G	Y	S	K	W	H	L	Q	R	M	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	K	D	V	T	G	H	A	I	G	A	Y	I	R	A	R	R	L	S	K	S	A
Template Known Secondary structure													T	T	T	S	S	.	.	S	S				T	T	T	T	T	T	T	S	S									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						S	S
Template Predicted Secondary structure																		.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.			20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.																			.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.
		425	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	K	L	I	A	A	E	N	P	A	K	P	L	S	D	S	K	L	T	S	L	L	S	E	Q	G	I	M	V	A	R	R	T	V	A	K	Y	R	E	S	L	S	I	P	P	S	N	Q	R	K	Q
Query Conservation
Alig confidence							.	.	.	.	.	.	.	.
Template Conservation							.	.	.	.	.	.	.	.
Template Sequence		V	A	L	R	L	.	.	.	.	.	.	.	.	T	A	R	P	I	L	D	I	A	L	Q	Y	R	F	D	S	Q	Q	T	F	T	R	A	F	K	K	Q	F	A	Q	T	P	A	L	Y	R	R	S
Template Known Secondary structure							.	.	.	.	.	.	.	.												T	T		S	S													S	S
Template Predicted Secondary structure							.	.	.	.	.	.	.	.
Template SS confidence
		64	.	.	.	.									.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions