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Job DescriptionP36673
Confidence93.97%DateThu Jan 5 11:53:39 GMT 2012
Rank155Aligned Residues200
% Identity10%Templatec3td9A_
PDB info PDB header:transport proteinChain: A: PDB Molecule:branched chain amino acid abc transporter, periplasmic PDBTitle: crystal structure of a leucine binding protein livk (tm1135) from2 thermotoga maritima msb8 at 1.90 a resolution
Resolution1.90 Å

  Insertion relative to template
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  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  DKVVAIIVTRLDSLSE. . NLAVQTMLPAFYEQG. . . . . . YDPIMMESQFSPQLVAEHLGVLKRR. NIDGVVLFGFT. . . G
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Template Sequence  VVKIAVILPXTGGISAFGRXVWEGIQIAHEEKPTVLGEEVELVLLDTRSEKTEAANAAARAIDKEKVLAIIGEVASAHSL
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Query Sequence  ITEEMLAHWQSSLVLLAR. . . . . . . DAKGFASVCYDDEGAIKILMQRLYDQ. GHRNISYLGVPHSDVTTGKRRHEAYLAF
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Template Sequence  AIAPIAEENKVPXVTPASTNPLVTQGRKFVSRVCFIDPFQGAAXAVFAYKNLGAKRVVVFT. . DVEQDYSVGLSNFFINK
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Query Sequence  CKAHKLHPVAALPGLAMKQGYENVAKVITPETTALL. CATDTLALGASKYLQEQRIDTLQLAS
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Template Sequence  FTELGGQVKRVFFRSGDQDFSAQLSVAXSFNPDAIYITGYYPEIALISRQARQLGFTGYILAG
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   178.180.........190.........200.........210.........220.........230.........240
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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