Return to main results Retrieve Phyre Job Id

Job DescriptionP36673
Confidence92.49%DateThu Jan 5 11:53:39 GMT 2012
Rank185Aligned Residues40
% Identity18%Templatec3pxpA_
PDB info PDB header:transcription regulatorChain: A: PDB Molecule:helix-turn-helix domain protein; PDBTitle: crystal structure of a pas and dna binding domain containing protein2 (caur_2278) from chloroflexus aurantiacus j-10-fl at 2.30 a3 resolution
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20........ .30.........40..
Predicted Secondary structure 









.



Query SS confidence 

























.













Query Sequence  NRLTIKDIARLSGVGKSTVSRVLNNE. SGVSQLTRERVEAV
Query Conservation 
  

 


   


  






  .  

  

 

   
Alig confidence 

























.













Template Conservation 



 



  



   




 

   

  

  

 
Template Sequence  RVWTQEVLAERTQLPKRTIERIENGSLAHLDADILLRLADA
Template Known Secondary structure 
B

T

T

S


Template Predicted Secondary structure 














Template SS confidence 








































   23......30.........40.........50.........60...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions