Job Description P36673 Confidence 99.97% Date Thu Jan 5 11:53:39 GMT 2012 Rank 35 Aligned Residues 253 % Identity 17% Template c3o74A_ PDB info PDB header:transcription Chain: A: PDB Molecule:fructose transport system repressor frur; PDBTitle: crystal structure of cra transcriptional dual regulator from2 pseudomonas putida Resolution 2.00 Å

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		61	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.				.	130	.	.	.	.	.	.	.
Predicted Secondary structure																																																																						.	.	.
Query SS confidence																																																																						.	.	.
Query Sequence		S	D	K	V	V	A	I	I	V	T	R	L	D	S	L	S	E	N	L	A	V	Q	T	M	L	P	A	F	Y	E	Q	G	Y	D	P	I	M	M	E	S	Q	F	S	P	Q	L	V	A	E	H	L	G	V	L	K	R	R	N	I	D	G	V	V	L	F	G	F	T	.	.	.	G	I	T	E	E	M	L	A	H
Query Conservation																																																																						.	.	.
Alig confidence																																																																						.	.	.
Template Conservation
Template Sequence		H	T	R	T	L	G	F	I	L	P	D	L	E	N	P	S	Y	A	R	I	A	K	Q	L	E	Q	G	A	R	A	R	G	Y	Q	L	L	I	A	S	S	D	D	Q	P	D	S	E	R	Q	L	Q	Q	L	F	R	A	R	R	C	D	A	L	F	V	A	S	C	L	P	P	E	D	D	S	Y	R	E	L	Q	D
Template Known Secondary structure											S		T	T																		T	T									T	T															T	T		S										S	S
Template Predicted Secondary structure
Template SS confidence
		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.
		138	.	140	.	.	.	.	.	.	.	.			.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.		.	.	.
Predicted Secondary structure													.	.																																																																.
Query SS confidence													.	.																																																																.
Query Sequence		W	Q	S	S	L	V	L	L	A	R	D	.	.	A	K	G	F	A	S	V	C	Y	D	D	E	G	A	I	K	I	L	M	Q	R	L	Y	D	Q	G	H	R	N	I	S	Y	L	G	V	P	H	S	D	V	T	T	G	K	R	R	H	E	A	Y	L	A	F	C	K	A	H	K	L	H	P	V	A	.	A	L	P
Query Conservation													.	.																																																																.
Alig confidence													.	.																																			.																													.
Template Conservation																																																	.
Template Sequence		K	G	L	P	V	I	A	I	D	R	R	L	D	P	A	H	F	C	S	V	I	S	D	D	R	D	A	S	R	Q	L	A	A	S	L	L	S	S	A	P	R	S	I	A	L	I	G	.	A	R	P	E	L	S	V	S	Q	A	R	A	G	G	F	D	E	A	L	Q	G	Y	T	G	E	V	R	R	Y	Q	G	E
Template Known Secondary structure		T	T							S	S				T	T	T																					T	T			S							.			T	T	S														T	T	T			S								S
Template Predicted Secondary structure																																																	.
Template SS confidence
		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.		.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
		215	.	.	.	.	220	.	.	.	.	.	.	.	.	.				230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.			.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																	.	.	.																											.	.
Query SS confidence																	.	.	.																											.	.
Query Sequence		G	L	A	M	K	Q	G	Y	E	N	V	A	K	V	I	.	.	.	T	P	E	T	T	A	L	L	C	A	T	D	T	L	A	L	G	A	S	K	Y	L	Q	E	Q	R	.	.	I	D	T	L	Q	L	A	S	V	G	N	T	P	L	M	K	F	L	H	P	E	I	V	T	V	D	P	G	Y	A	E	A	G	R
Query Conservation																	.	.	.																											.	.
Alig confidence																	.	.	.																											.	.
Template Conservation
Template Sequence		A	F	S	R	E	C	G	Q	R	L	X	Q	Q	L	I	D	D	L	G	G	L	P	D	A	L	V	T	T	S	Y	V	L	L	Q	G	V	F	D	T	L	Q	A	R	P	V	D	S	R	Q	L	Q	L	G	T	F	G	D	N	Q	L	L	D	F	L	P	L	P	V	N	A	X	A	Q	Q	H	G	Q	I	A	A
Template Known Secondary structure		S	S	S																T	S			S					S	S													T	S		G	G	G									S			G	G	G	G	T	S	S	S
Template Predicted Secondary structure
Template SS confidence
		219	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.
		290	.	.	.	.	.	.	.	.	.	300	.	.	.		.	.	.	.	.	.	310	.	.	.	.
Predicted Secondary structure																.
Query SS confidence																.
Query Sequence		Q	A	A	C	Q	L	I	A	Q	V	T	G	R	S	.	E	P	Q	Q	I	I	I	P	A	T	L
Query Conservation																.
Alig confidence																.
Template Conservation
Template Sequence		T	A	L	E	L	A	L	A	A	I	E	E	K	R	Y	E	P	G	V	H	A	V	G	R	T	F
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		299	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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