Job Description P36673 Confidence 100.00% Date Thu Jan 5 11:53:39 GMT 2012 Rank 13 Aligned Residues 253 % Identity 19% Template c3k4hA_ PDB info PDB header:transcription regulator Chain: A: PDB Molecule:putative transcriptional regulator; PDBTitle: crystal structure of putative transcriptional regulator laci from2 bacillus cereus subsp. cytotoxis nvh 391-98 Resolution 2.80 Å

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		61	.	.	.	.	.	.	.	.	70	.						.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.			.	130	.	.	.
Predicted Secondary structure													.	.	.	.	.																																																										.	.
Query SS confidence													.	.	.	.	.																																																										.	.
Query Sequence		S	D	K	V	V	A	I	I	V	T	R	.	.	.	.	.	L	D	S	L	S	E	N	L	A	V	Q	T	M	L	P	A	F	Y	E	Q	G	Y	D	P	I	M	M	E	S	Q	F	S	P	Q	L	V	A	E	H	L	G	V	L	K	R	R	N	I	D	G	V	V	L	F	G	F	T	.	.	G	I	T	E	E
Query Conservation													.	.	.	.	.																																																										.	.
Alig confidence													.	.	.	.	.																																																										.	.
Template Conservation
Template Sequence		T	T	K	T	L	G	L	V	X	P	S	S	A	S	K	A	F	Q	N	P	F	F	P	E	V	I	R	G	I	S	S	F	A	H	V	E	G	Y	A	L	Y	X	S	T	G	E	T	E	E	E	I	F	N	G	V	V	K	X	V	Q	G	R	Q	I	G	G	I	I	L	L	Y	S	R	E	N	D	R	I	I	Q
Template Known Secondary structure											S	S						T	T	S	T																T	T										S														T	T								S			B	T	T
Template Predicted Secondary structure
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		134	.	.	.	.	.	140	.	.	.	.	.	.	.	.				.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.
Predicted Secondary structure																	.	.	.																																																													.	.
Query SS confidence																	.	.	.																																																													.	.
Query Sequence		M	L	A	H	W	Q	S	S	L	V	L	L	A	R	D	.	.	.	A	K	G	F	A	S	V	C	Y	D	D	E	G	A	I	K	I	L	M	Q	R	L	Y	D	Q	G	H	R	N	I	S	Y	L	G	V	P	H	S	D	V	T	T	G	K	R	R	H	E	A	Y	L	A	F	C	K	A	H	K	L	H	.	.
Query Conservation																	.	.	.																																																													.	.
Alig confidence																	.	.	.																																			.																										.	.
Template Conservation																																																						.
Template Sequence		Y	L	H	E	Q	N	F	P	F	V	L	I	G	K	P	Y	D	R	K	D	E	I	T	Y	V	D	N	D	N	Y	T	A	A	R	E	V	A	E	Y	L	I	S	L	G	H	K	Q	I	A	F	I	G	.	G	G	S	D	L	L	V	T	R	D	R	L	A	G	X	S	D	A	L	K	L	A	D	I	V	L	P
Template Known Secondary structure						T	T							S			S	S		T	T	T	S																					T	T									.	S		T	T	B																	T	T
Template Predicted Secondary structure																																																						.
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.		.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
			209	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.			.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.				.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.
Predicted Secondary structure		.																					.	.																												.	.	.
Query SS confidence		.																					.	.																												.	.	.
Query Sequence		.	P	V	A	A	L	P	G	L	A	M	K	Q	G	Y	E	N	V	A	K	V	.	.	I	T	P	E	T	T	A	L	L	C	A	T	D	T	L	A	L	G	A	S	K	Y	L	Q	E	Q	R	.	.	.	I	D	T	L	Q	L	A	S	V	G	N	T	P	L	M	K	F	L	H	P	E	I	V	T	V	D	P
Query Conservation		.																					.	.																												.	.	.
Alig confidence		.																					.	.																												.	.	.
Template Conservation
Template Sequence		K	E	Y	I	L	H	F	D	F	S	R	E	S	G	Q	Q	A	V	E	E	L	X	G	L	Q	Q	P	P	T	A	I	X	A	T	D	D	L	I	G	L	G	V	L	S	A	L	S	K	K	G	F	V	V	P	K	D	V	S	I	V	S	F	N	N	A	L	L	S	E	I	A	S	P	P	L	S	T	V	D	V
Template Known Secondary structure		G	G	G						S	S													T	S	S	S			S					S	S														T	T			T	T	T	T							S								S	S	S
Template Predicted Secondary structure
Template SS confidence
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
		283	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.		.	.	.	.	310	.	.	.	.
Predicted Secondary structure																									.
Query SS confidence																									.
Query Sequence		G	Y	A	E	A	G	R	Q	A	A	C	Q	L	I	A	Q	V	T	G	R	S	E	P	.	Q	Q	I	I	I	P	A	T	L
Query Conservation																									.
Alig confidence																									.
Template Conservation
Template Sequence		N	I	Y	Q	L	G	Y	E	A	A	K	A	L	V	D	K	V	E	N	A	E	S	T	A	K	C	I	I	I	P	H	K	L
Template Known Secondary structure																						S
Template Predicted Secondary structure
Template SS confidence
		246	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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