Job Description P36673 Confidence 99.98% Date Thu Jan 5 11:53:39 GMT 2012 Rank 18 Aligned Residues 247 % Identity 19% Template c3d8uA_ PDB info PDB header:transcription regulator Chain: A: PDB Molecule:purr transcriptional regulator; PDBTitle: the crystal structure of a purr family transcriptional regulator from2 vibrio parahaemolyticus rimd 2210633 Resolution 2.88 Å

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		63	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.			.	.	.	.	.	.	.	.	140
Predicted Secondary structure																																																																							.	.
Query SS confidence																																																																							.	.
Query Sequence		K	V	V	A	I	I	V	T	R	L	D	S	L	S	E	N	L	A	V	Q	T	M	L	P	A	F	Y	E	Q	G	Y	D	P	I	M	M	E	S	Q	F	S	P	Q	L	V	A	E	H	L	G	V	L	K	R	R	N	I	D	G	V	V	L	F	G	F	T	G	I	T	.	.	E	E	M	L	A	H	W	Q	S
Query Conservation																																																																							.	.
Alig confidence																																																																							.	.
Template Conservation
Template Sequence		Y	S	I	A	L	I	I	P	S	L	F	E	K	A	C	A	H	F	L	P	S	F	Q	Q	A	L	N	K	A	G	Y	Q	L	L	L	G	Y	S	D	Y	S	I	E	Q	E	E	K	L	L	S	T	F	L	E	S	R	P	A	G	V	V	L	F	G	S	E	H	S	Q	R	T	H	Q	L	L	E	A	S	N	T
Template Known Secondary structure									S		S	S																		T	S									T	T														T	S									S	S														T
Template Predicted Secondary structure
Template SS confidence
		71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
		141	.	.	.	.	.	.	.			.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210				.	.	.	.	.
Predicted Secondary structure										.	.																																																															.	.	.
Query SS confidence										.	.																																																															.	.	.
Query Sequence		S	L	V	L	L	A	R	D	.	.	A	K	G	F	A	S	V	C	Y	D	D	E	G	A	I	K	I	L	M	Q	R	L	Y	D	Q	G	H	R	N	I	S	Y	L	G	V	P	H	S	D	V	T	T	G	K	R	R	H	E	A	Y	L	A	F	C	K	A	H	K	L	H	P	V	.	.	.	A	A	L	P	G
Query Conservation										.	.																																																															.	.	.
Alig confidence										.	.																																			.																												.	.	.
Template Conservation																																														.
Template Sequence		P	V	L	E	I	A	E	L	S	S	K	A	S	Y	L	N	I	G	V	D	H	F	E	V	G	K	A	C	T	R	H	L	I	E	Q	G	F	K	N	V	G	F	I	G	.	A	R	G	N	H	S	T	L	Q	R	Q	L	H	G	W	Q	S	A	X	I	E	N	Y	L	T	P	D	H	F	L	T	T	H	E	A
Template Known Secondary structure							S	S	S		S	S	S	S	S					B															T	T	T									.		S		S	S																	T	T										S	S
Template Predicted Secondary structure																																														.
Template SS confidence
		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.		.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
		216	.	.	.	220	.	.	.	.	.	.	.	.	.	230			.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.				.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290
Predicted Secondary structure																	.	.																										.	.	.
Query SS confidence																	.	.																										.	.	.
Query Sequence		L	A	M	K	Q	G	Y	E	N	V	A	K	V	I	T	.	.	P	E	T	T	A	L	L	C	A	T	D	T	L	A	L	G	A	S	K	Y	L	Q	E	Q	R	.	.	.	I	D	T	L	Q	L	A	S	V	G	N	T	P	L	M	K	F	L	H	P	E	I	V	T	V	D	P	G	Y	A	E	A	G	R	Q
Query Conservation																	.	.																										.	.	.
Alig confidence																	.	.																										.	.	.
Template Conservation
Template Sequence		P	S	S	Q	L	G	A	E	G	L	A	K	L	L	L	R	D	S	S	L	N	A	L	V	C	S	H	E	E	I	A	I	G	A	L	F	E	C	H	R	R	V	L	K	V	P	T	D	I	A	I	I	C	L	E	G	S	S	X	G	E	H	A	Y	P	S	L	T	S	A	E	F	D	Y	E	R	X	G	T	K
Template Known Secondary structure																T	T		T	T							S	S														T	T			T	T	T	T						S	S							T	S	S	S
Template Predicted Secondary structure
Template SS confidence
		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.
		291	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	C	Q	L	I	A	Q	V	T	G	R	S	E	P	Q	Q	I	I	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	A	E	K	L	L	H	A	I	K	G	E	S	X	G	F	K	L	K	R
Template Known Secondary structure											S				B
Template Predicted Secondary structure
Template SS confidence
		310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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