Job Description P36673 Confidence 100.00% Date Thu Jan 5 11:53:39 GMT 2012 Rank 14 Aligned Residues 248 % Identity 16% Template c3cs3A_ PDB info PDB header:transcription regulator Chain: A: PDB Molecule:sugar-binding transcriptional regulator, laci family; PDBTitle: crystal structure of sugar-binding transcriptional regulator (laci2 family) from enterococcus faecalis Resolution 2.40 Å

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		58	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.			.	130	.	.	.	.	.
Predicted Secondary structure																																																																									.	.
Query SS confidence																																																																									.	.
Query Sequence		R	G	Q	S	D	K	V	V	A	I	I	V	T	R	L	D	S	L	S	E	N	L	A	V	Q	T	M	L	P	A	F	Y	E	Q	G	Y	D	P	I	M	M	E	S	Q	F	S	P	Q	L	V	A	E	H	L	G	V	L	K	R	R	N	I	D	G	V	V	L	F	G	F	T	.	.	G	I	T	E	E	M	L
Query Conservation																																																																									.	.
Alig confidence																																																			.	.	.	.	.	.	.																.	.
Template Conservation																																																			.	.	.	.	.	.	.
Template Sequence		K	R	R	Q	T	N	I	I	G	V	Y	L	A	D	Y	G	G	S	F	Y	G	E	L	L	E	G	I	K	K	G	L	A	L	F	D	Y	E	M	I	V	C	S	G	K	K	S	H	L	F	.	.	.	.	.	.	.	I	P	E	K	M	V	D	G	A	I	I	L	D	W	T	F	P	T	K	E	I	E	K	F
Template Known Secondary structure															S	S		T	T	T														T	T	T								S	T	T	T	T	T		.	.	.	.	.	.	.			T	T	T		S							T	T	S
Template Predicted Secondary structure																																																			.	.	.	.	.	.	.
Template SS confidence
		55	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.								.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.
		136	.	.	.	140	.	.	.	.	.	.	.	.			.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.
Predicted Secondary structure															.	.
Query SS confidence															.	.
Query Sequence		A	H	W	Q	S	S	L	V	L	L	A	R	D	.	.	A	K	G	F	A	S	V	C	Y	D	D	E	G	A	I	K	I	L	M	Q	R	L	Y	D	Q	G	H	R	N	I	S	Y	L	G	V	P	H	S	D	V	T	T	G	K	R	R	H	E	A	Y	L	A	F	C	K	A	H	K	L	H	P	V	A	A	L
Query Conservation															.	.
Alig confidence															.	.																																			.
Template Conservation																																																			.
Template Sequence		A	E	R	G	H	S	I	V	V	L	D	R	T	T	E	H	R	N	I	R	Q	V	L	L	D	N	R	G	G	A	T	Q	A	I	E	Q	F	V	N	V	G	S	K	K	V	L	L	L	S	.	G	P	E	K	G	Y	D	S	Q	E	R	L	A	V	S	T	R	E	L	T	R	F	G	I	P	Y	E	I	I	Q
Template Known Secondary structure				T	T						S	S	S				S	T	T																						T	T		S							.			T	T	S																	T	T
Template Predicted Secondary structure																																																			.
Template SS confidence
		128	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.		.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
		214	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230				.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.				.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.
Predicted Secondary structure																			.	.	.																										.	.	.
Query SS confidence																			.	.	.																										.	.	.
Query Sequence		P	G	L	A	M	K	Q	G	Y	E	N	V	A	K	V	I	T	.	.	.	P	E	T	T	A	L	L	C	A	T	D	T	L	A	L	G	A	S	K	Y	L	Q	E	Q	R	.	.	.	I	D	T	L	Q	L	A	S	V	G	N	T	P	L	M	K	F	L	H	P	E	I	V	T	V	D	P	G	Y	A	E	A
Query Conservation																			.	.	.																										.	.	.
Alig confidence																			.	.	.																										.	.	.
Template Conservation
Template Sequence		G	D	F	T	E	P	S	G	Y	A	A	A	K	K	I	L	S	Q	P	Q	T	E	P	V	D	V	F	A	F	N	D	E	M	A	I	G	V	Y	K	Y	V	A	E	T	N	Y	Q	M	G	K	D	I	R	I	I	G	F	D	N	S	E	L	G	A	F	V	Q	P	R	L	A	T	I	A	Y	S	K	H	R	W
Template Known Secondary structure				S	S												T	T	S				S	S						S	S												T	T	S	S			B	T	T	T						S	S								S	S	S			B
Template Predicted Secondary structure
Template SS confidence
		207	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.
		288	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	R	Q	A	A	C	Q	L	I	A	Q	V	T	G	R	S	E	P	Q	Q	I	I	I	P	A	T	L
Query Conservation
Alig confidence																						.
Template Conservation																						.
Template Sequence		G	M	V	A	A	E	K	I	I	H	L	M	R	G	E	A	A	E	S	E	.	H	I	Y	T	R	F
Template Known Secondary structure														T	T							.
Template Predicted Secondary structure																						.
Template SS confidence
		287	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.		.	.	.	310	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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