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Job DescriptionP36673
Confidence100.00%DateThu Jan 5 11:53:39 GMT 2012
Rank11Aligned Residues250
% Identity18%Templatec3c3kA_
PDB info PDB header:isomeraseChain: A: PDB Molecule:alanine racemase; PDBTitle: crystal structure of an uncharacterized protein from actinobacillus2 succinogenes
Resolution1.99 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   61........70.........80.........90.........100.........110.........120........ .130.........
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Query Sequence  SDKVVAIIVTRLDSLSENLAVQTMLPAFYEQGYDPIMMESQFSPQLVAEHLGVLKRRNIDGVVLFGFT. GITEEMLAHWQ
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Template Sequence  KTGMLLVMVSNIANPFCAAVVKGIEKTAEKNGYRILLCNTESDLARSRSCLTLLSGKMVDGVITMDALSELPELQNIIGA
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S
TTSTT

TT
TTT

S


GGGTT
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   7..10.........20.........30.........40.........50.........60.........70.........80......
 
   140........ .150.........160.........170.........180.........190.........200....... ..210.....
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Query Sequence  SSLVLLARD. . AKGFASVCYDDEGAIKILMQRLYDQGHRNISYLGVPHSDVTTGKRRHEAYLAFCKAHKL. . HPVAALPG
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Template Sequence  FPWVQCAEYDPLSTVSSVSIDDVAASEYVVDQLVKSGKKRIALIN. HDLAYQYAQHRESGYLNRLKFHGLDYSRISYAEN
Template Known Secondary structure  SSSS

TTSSS


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   87..90.........100.........110.........120.........130. ........140.........150.........160.....
 
   216...220.........230 .........240.........250..... ....260.........270.........280.........290
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Query Sequence  LAMKQGYENVAKVIT. . PETTALLCATDTLALGASKYLQEQR. . . IDTLQLASVGNTPLMKFLHPEIVTVDPGYAEAGRQ
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Template Sequence  LDYMAGKLATFSLLKSAVKPDAIFAISDVLAAGAIQALTESGLSIPQDVAVVGFDGVDISQITVPALTTVQQPSEQIGMK
Template Known Secondary structure  SSSSSS

SSSTT

TTTT

SB

GGGGTSSS

B

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   166...170.........180.........190.........200.........210.........220.........230.........240.....
 
   291........300.........310....
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Query Sequence  AACQLIAQVTGRSEPQQIIIPATL
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Template Sequence  AVSLLLEQIHS. . . DVHHLLPWKF
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   246...250...... ...260......
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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