Job Description P36673 Confidence 84.70% Date Thu Jan 5 11:53:39 GMT 2012 Rank 436 Aligned Residues 83 % Identity 17% Template c2xroE_ PDB info PDB header:dna-binding protein/dna Chain: E: PDB Molecule:hth-type transcriptional regulator ttgv; PDBTitle: crystal structure of ttgv in complex with its dna operator Resolution 3.40 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	T	I	K	D	I	A	R	L	S	G	V	G	K	S	T	V	S	R	V	L	N	N	E	S	G	V	S	Q	L	T	R	E	R	V	E	A	V	M	N	Q	H	G	F	S	P	S	R	S	A	R	A	M	R	G	Q	S	D	K	V	V	A	I	I	V	T	R	L	D	S	L	S	E	N	L	A	V	Q	T	M
Query Conservation
Alig confidence																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.
Template Conservation																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.
Template Sequence		L	S	L	A	A	I	A	Q	L	V	G	L	P	R	S	T	V	Q	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	I	N	A	L	E	E	E	F	L	V	E	A	L	G	.	P	A	G	G	F	R	L	G	P	A	L	G	Q	L	I	N	Q	A	Q	T	D	I	L	S	L	V	K	P	Y	L
Template Known Secondary structure		B									S	S									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							T	T	T	S					S	.	S	S	S						T								T	T	T	T	T
Template Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.
Template SS confidence
		34	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.																.	.	.	.	.	.	.	60	.	.	.	.	.	.	.		.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	P	A	F	Y	E	Q	G	Y	D	P	I	M	M	E	S	Q	F	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	S	L	A	E	E	L	D	E	S	V	S	L	A	S	L	A	G	D
Template Known Secondary structure								S		S									T	T
Template Predicted Secondary structure
Template SS confidence
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions