Job Description P36673 Confidence 99.71% Date Thu Jan 5 11:53:39 GMT 2012 Rank 70 Aligned Residues 238 % Identity 13% Template c2qh8A_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: crystal structure of conserved domain protein from vibrio2 cholerae o1 biovar eltor str. n16961 Resolution 2.20 Å

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		61	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.							.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.
Predicted Secondary structure																																			.	.	.	.	.	.
Query SS confidence																																			.	.	.	.	.	.
Query Sequence		S	D	K	V	V	A	I	I	V	T	R	L	D	S	L	S	E	N	L	A	V	Q	T	M	L	P	A	F	Y	E	Q	G	Y	.	.	.	.	.	.	D	P	I	M	M	E	S	Q	F	S	P	Q	L	V	A	E	H	L	G	V	L	K	R	R	N	I	D	G	V	V	L	F	G	F	T	G	I	T	E	E	M
Query Conservation																																			.	.	.	.	.	.
Alig confidence								.																											.	.	.	.	.	.
Template Conservation								.
Template Sequence		K	T	A	K	V	A	.	V	S	Q	I	V	E	H	P	A	L	D	A	T	R	Q	G	L	L	D	G	L	K	A	K	G	Y	E	E	G	K	N	L	E	F	D	Y	K	T	A	Q	G	N	P	A	I	A	V	Q	I	A	R	Q	F	V	G	E	N	P	D	V	L	V	G	I	A	T	P	T	A	Q	A	L	V
Template Known Secondary structure								.				S	S																			T	T			B	T	T	T									T	T															T			S						S
Template Predicted Secondary structure								.
Template SS confidence
		26	.	.	.	30	.		.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
		135	.	.	.	.	140	.	.	.	.	.	.	.															.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200
Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence															.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	A	H	W	Q	S	S	L	V	L	L	A	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	A	K	G	F	A	S	V	C	Y	D	D	E	G	A	I	K	I	L	M	Q	R	L	Y	D	Q	G	H	R	N	I	S	Y	L	G	V	P	H	S	D	V	T	T	G	K	R	R	H	E	A	Y	L	A
Query Conservation															.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence															.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.	.
Template Conservation																																																																.	.
Template Sequence		S	A	T	K	T	I	P	I	V	F	T	A	V	T	D	P	V	G	A	K	L	V	K	Q	L	E	Q	P	G	K	N	V	T	G	L	S	D	L	S	P	V	E	Q	H	V	E	L	I	K	E	I	L	P	N	V	K	S	I	G	V	V	Y	.	.	N	P	G	E	A	N	A	V	S	L	X	E	L	L	K	L
Template Known Secondary structure					S	S	S								S		T	T	T	T	T	S		S		S	S	S			S	S																					S	T	T									.	.		T	T
Template Predicted Secondary structure																																																																.	.
Template SS confidence
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.			.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
		201	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.		.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																									.
Query SS confidence																																																									.
Query Sequence		F	C	K	A	H	K	L	H	P	V	A	A	L	P	G	L	A	M	K	Q	G	Y	E	N	V	A	K	V	I	T	P	E	T	T	A	L	L	C	A	T	D	T	L	A	L	G	A	S	K	Y	L	Q	E	Q	R	.	I	D	T	L	Q	L	A	S	V	G	N	T	P	L	M	K	F	L	H	P	E	I	V	T
Query Conservation																																																									.
Alig confidence																														.	.																										.																.	.	.
Template Conservation																														.	.																																										.	.	.
Template Sequence		S	A	A	K	H	G	I	K	L	V	E	A	T	A	L	K	S	A	D	V	Q	S	A	T	Q	A	I	A	.	.	E	K	S	D	V	I	Y	A	L	I	D	N	T	V	A	S	A	I	E	G	X	I	V	A	A	N	Q	A	K	T	P	V	F	G	A	A	T	S	Y	V	E	.	.	.	R	G	A	I	A	S
Template Known Secondary structure						T	T									S	S	G	G	G									G	.	.	G	G		S						S						T	T											T	T						S	S						.	.	.	T	T		S
Template Predicted Secondary structure																														.	.																																										.	.	.
Template SS confidence
		183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210			.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.				.	.	.	.	.	.
		280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	D	P	G	Y	A	E	A	G	R	Q	A	A	C	Q	L	I	A	Q	V	T	G	R	S	E	P	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	G	F	D	Y	Y	Q	I	G	V	Q	T	A	D	Y	V	A	A	I	L	E	G	K	E	P	G	S
Template Known Secondary structure																						T	T			G	G	G
Template Predicted Secondary structure
Template SS confidence
		258	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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