Job Description P36673 Confidence 86.07% Date Thu Jan 5 11:53:39 GMT 2012 Rank 413 Aligned Residues 87 % Identity 9% Template c1mkmA_ PDB info PDB header:transcription Chain: A: PDB Molecule:iclr transcriptional regulator; PDBTitle: crystal structure of the thermotoga maritima iclr Resolution 2.20 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	N	R	L	T	I	K	D	I	A	R	L	S	G	V	G	K	S	T	V	S	R	V	L	N	N	E	S	G	V	S	Q	L	T	R	E	R	V	E	A	V	M	N	Q	H	G	F	S	P	S	R	S	A	R	A	M	R	G	Q	S	D	K	V	V	A	I	I	V	T	R	L	D	S	L	S	E	N	L	A	V
Query Conservation
Alig confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	G	D	V	S	V	S	E	I	A	E	K	F	N	M	S	V	S	N	A	Y	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	M	V	V	L	E	E	K	G	F	V	L	R	K	K	D	K	R	Y	V	P	G	Y	K	L	I	E	Y	G	S	F	V	L	R	R	F	N	I	R	D	I	A	H
Template Known Secondary structure		S	S		B									T	T									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								T	T	S					T	T	S						T
Template Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.																40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	T	M	L	P	A	F	Y	E	Q	G	Y	D	P	I	M	M	E	S	Q	F	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	H	L	V	D	I	M	K	R	T	G	E	T	V	H	L	I	L	K	D	G	F
Template Known Secondary structure										T	T		S									S	S
Template Predicted Secondary structure
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions