Job Description P76236 Confidence 99.91% Date Thu Jan 5 12:21:01 GMT 2012 Rank 11 Aligned Residues 154 % Identity 23% Template c3qyyB_ PDB info PDB header:signaling protein/inhibitor Chain: B: PDB Molecule:response regulator; PDBTitle: a novel interaction mode between a microbial ggdef domain and the bis-2 (3, 5 )-cyclic di-gmp Resolution 1.90 Å

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		323	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.			.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400
Predicted Secondary structure																																	.	.
Query SS confidence																																	.	.
Query Sequence		L	S	S	K	L	A	V	H	D	V	L	T	N	I	Y	N	R	R	Y	F	F	N	S	V	E	S	L	L	S	R	P	.	.	V	V	K	D	F	C	V	M	L	V	D	I	N	Q	F	K	R	I	N	A	Q	W	G	H	R	V	G	D	K	V	L	V	S	I	V	D	I	I	Q	Q	S	I	R	P	D	D	I
Query Conservation																																	.	.
Alig confidence																																	.	.
Template Conservation
Template Sequence		D	L	K	R	H	A	L	F	D	P	L	T	E	A	L	N	R	R	G	C	E	Q	A	M	R	D	S	V	T	A	A	Q	R	E	G	W	P	F	V	L	F	V	L	D	M	D	N	L	K	P	I	N	D	R	F	G	H	L	A	G	D	R	V	L	V	R	L	V	E	S	A	Y	G	W	L	G	A	Q	D	W
Template Known Secondary structure									B		T	T	T		S	B																			T												S	S																										T	T			T	T
Template Predicted Secondary structure
Template SS confidence
		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.
		401	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	R	L	E	G	E	V	F	G	L	L	F	T	E	L	N	S	A	Q	A	K	I	I	A	E	R	M	R	K	N	V	E	L	L	T	G	F	S	N	R	Y	D	V	P	E	Q	M	T	I	S	I	G	T	V	F	S	T	G	D	T	R	N	I	S	L	V	M	T	E	A	D	K	A	L	R	E	A	K	S
Query Conservation
Alig confidence																																					.	.	.	.	.	.	.	.	.	.	.	.									.
Template Conservation																																					.	.	.	.	.	.	.	.	.	.	.	.									.
Template Sequence		I	G	R	W	G	G	D	E	F	L	I	G	V	H	A	S	E	D	E	A	T	L	K	L	N	Q	W	L	S	M	L	E	E	A	P	.	.	.	.	.	.	.	.	.	.	.	.	L	H	V	S	A	G	S	A	.	V	C	E	V	G	I	D	A	T	E	L	Y	R	R	A	D	A	A	M	Y	R	A	K	F
Template Known Secondary structure							T	T								S																					.	.	.	.	.	.	.	.	.	.	.	.									.				T	T
Template Predicted Secondary structure																																					.	.	.	.	.	.	.	.	.	.	.	.									.
Template SS confidence
		210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.													.	.	.	.	.	250	.	.		.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.
		481	.	.	.	.	.	.	.	.	490
Predicted Secondary structure
Query SS confidence
Query Sequence		E	G	G	N	K	V	I	I	H	H
Query Conservation
Alig confidence								.
Template Conservation								.
Template Sequence		S	G	G	R	R	L	.	V	R	D
Template Known Secondary structure		T	T	S	S			.
Template Predicted Secondary structure								.
Template SS confidence
		282	.	.	.	.	.		.	.	290

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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