Job Description P76236 Confidence 99.85% Date Thu Jan 5 12:21:01 GMT 2012 Rank 13 Aligned Residues 175 % Identity 19% Template c3pjwA_ PDB info PDB header:lyase Chain: A: PDB Molecule:cyclic dimeric gmp binding protein; PDBTitle: structure of pseudomonas fluorescence lapd ggdef-eal dual domain, i23 Resolution 3.10 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		312	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.		.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390
Predicted Secondary structure																																															.
Query SS confidence																																															.
Query Sequence		F	L	I	Y	N	I	F	Q	E	L	Q	L	S	S	K	L	A	V	H	D	V	L	T	N	I	Y	N	R	R	Y	F	F	N	S	V	E	S	L	L	S	R	P	V	V	K	.	D	F	C	V	M	L	V	D	I	N	Q	F	K	R	I	N	A	Q	W	G	H	R	V	G	D	K	V	L	V	S	I	V	D	I
Query Conservation																																															.
Alig confidence																																															.
Template Conservation
Template Sequence		A	L	F	Q	E	Q	A	E	R	S	E	K	L	R	T	E	S	Y	Q	D	N	L	T	G	L	A	N	R	R	Y	F	E	M	Q	L	N	A	R	V	S	N	P	E	Q	A	S	S	G	Y	L	L	L	L	R	V	K	D	L	A	G	L	N	Q	R	L	G	G	Q	R	T	D	E	L	L	K	A	V	G	E	Q
Template Known Secondary structure								T	T											B		T	T	T	S	S														T	T		T	T	T												S
Template Predicted Secondary structure
Template SS confidence
		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.
		391	.	.	.	.					.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.
Predicted Secondary structure							.	.	.	.
Query SS confidence							.	.	.	.
Query Sequence		I	Q	Q	S	I	.	.	.	.	R	P	D	D	I	L	A	R	L	E	G	E	V	F	G	L	L	F	T	E	L	N	S	A	Q	A	K	I	I	A	E	R	M	R	K	N	V	E	L	L	T	G	F	S	N	R	Y	D	V	P	E	Q	M	T	I	S	I	G	T	V	F	S	T	G	D	T	R	N	I	S	L
Query Conservation							.	.	.	.
Alig confidence							.	.	.	.																																																.	.	.																.
Template Conservation																																																										.	.	.																.
Template Sequence		L	S	R	E	C	A	K	Y	P	E	T	Q	N	L	V	T	R	I	R	G	G	E	F	A	V	L	A	P	G	M	T	R	E	E	A	L	Q	L	A	Q	S	L	D	S	A	L	S	S	L	Y	A	T	G	A	T	D	.	.	.	V	A	A	V	A	S	I	G	L	A	P	F	A	H	G	.	D	S	P	Q	A
Template Known Secondary structure							S	S		S	T	T	T	T							T	T								T																		T						T	S		S	.	.	.		T	T											T	T	.
Template Predicted Secondary structure																																																										.	.	.																.
Template SS confidence
		300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.				.	.	.	.	360	.	.	.	.	.	.	.	.	.	370		.	.	.	.	.
		467	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Predicted Secondary structure
Query SS confidence
Query Sequence		V	M	T	E	A	D	K	A	L	R	E	A	K	S	E	G	G	N	K	V	I	I	H	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	L	S	L	G	D	Q	A	L	A	Q	A	E	G	Q	G	E	Q	N	W	A	C	L	D
Template Known Secondary structure															S		S	S		S
Template Predicted Secondary structure
Template SS confidence
		376	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions