 |
Job Description | P76236 | Confidence | 91.56% | Date | Thu Jan 5 12:21:01 GMT 2012 |
Rank | 26 | Aligned Residues | 135 |
% Identity | 14% | Template | c2w01C_ |
PDB info |
PDB header:lyase | Chain: C: PDB Molecule:adenylate cyclase; |
PDBTitle: crystal structure of the guanylyl cyclase cya2
|
Resolution | 2.31 Å |
|
 |
  |   |
354 | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | |
. | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | |
|
|
|
|
. | . | . | . | 420 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| . |
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
| . | . | . | . | . |
|
|  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | V | K | D | F | C | V | M | L | V | D | I | N | Q | F | K | R | I | N | A | Q | W | G | H | R | V | G | D | K | V | L | V | S | I | V | D | I | I | Q | Q | S | I | . |
R | P | D | D | I | L | A | R | L | E | G | E | V | F | G | L | L | F | T | E | . |
. |
. |
. |
. |
L | N | S | A | Q | A | K | I | I | A | E | R |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |
|
|
|
|   |
|
|   |
|
|
|   |   |
|
|   |   |
|
|   |   |
|   |   |
|
|   |   |
|   |   |   |   | . |   |   |   |
|   |
|   |
|   |
|
|
|
|
|   |
|
|
|   |   | . | . | . | . | . |   |   |   |   |   |
|   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|   |
|
|
|
|
|   |
|
|   |   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|   |   |   |   |   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |
Template Sequence |   |
D | R | R | P | I | T | I | L | T | S | D | L | R | G | F | T | S | T | S | E | G | L | N | P | E | E | V | V | K | V | L | N | I | Y | F | G | K | M | A | D | V | I | T | H | H | G | G | T | I | D | E | F | M | G | D | G | I | L | V | L | F | G | A | P | T | S | Q | Q | D | D | A | L | R | A | V | A | C | G | V | E |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  | T | T |  |  |  |  |  | T | T | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |  | T | T |  |  |  |  |  |  | S | S | S | S |
|
| T | T |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
438 | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . | . | . | . | . | . | . | . | 460 | . | . | . | . | . | . | . | . | . | 470 | . | . | . | . | . | . | . | . | . | 480 | . | . | . | . | . | . | . | . | . | 490 | . | . | . | . | . | . | . | . | . | 500 | . | . | . | . | . | . | . | . | . | 510 | . | . | . | . | . | . | . |
  |
  |   |
428 | . | 430 | . | . | . | |
|
|
. | . | . | . | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . | . | . | . | . | . | |
|
|
|
. | . | 460 | . | . | . | . | . | . | . | . | . | 470 | . | . | . | . | . | . | . | . | . | 480 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  | . | . | . |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
M | R | K | N | V | E | . |
. |
. |
L | L | T | G | F | S | N | R | Y | D | V | P | E | Q | M | T | I | S | I | G | T | V | F | S | . |
. |
. |
. |
T | G | D | T | R | N | I | S | L | V | M | T | E | A | D | K | A | L | R | E | A | K | S | E | G | G | N | K | V | I | I |
Query Conservation |   |
|   |   |   |
|   | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |
|
|
|   |   |   |   | . | . | . | . |   |   |   |   |   |   |   |   |   |
|   |   |   |
|
|   |
|
|
|   |
|
|   |   |
|
|
|   |
|   |   |
Alig confidence |   |
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|
|
|   |   |
|   |   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |
|   |
|   |   |
|
|   |
|
|
|
|   |   |   |
|   |   |
|   |
|   |
|
Template Sequence |   |
M | Q | L | A | L | R | E | V | N | Q | Q | V | T | G | L | G | L | Q | P | L | E | M | G | I | G | I | N | T | G | E | V | V | V | G | N | I | G | S | E | K | R | T | K | Y | G | V | V | G | A | Q | V | N | L | T | Y | R | I | E | S | Y | T | T | G | G | Q | I | F | I |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | S | S | S |
|  |  |  |  |  |  | S |  |  |  |  |  |  |  |  |  |  |  | T |
|
| T | T |
|  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
518 | . | 520 | . | . | . | . | . | . | . | . | . | 530 | . | . | . | . | . | . | . | . | . | 540 | . | . | . | . | . | . | . | . | . | 550 | . | . | . | . | . | . | . | . | . | 560 | . | . | . | . | . | . | . | . | . | 570 | . | . | . | . | . | . | . | . | . | 580 | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|