Job Description P76236 Confidence 33.05% Date Thu Jan 5 12:21:01 GMT 2012 Rank 64 Aligned Residues 68 % Identity 22% Template c1t3nB_ PDB info PDB header:replication/dna Chain: B: PDB Molecule:polymerase (dna directed) iota; PDBTitle: structure of the catalytic core of dna polymerase iota in2 complex with dna and dttp Resolution 2.30 Å

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		375	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Predicted Secondary structure																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		W	G	H	R	V	G	D	K	V	L	V	S	I	V	D	I	I	Q	Q	S	I	R	P	D	D	I	L	A	R	L	E	G	E	V	F	G	L	L	F	T	E	L	N	S	A	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																									.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																									.	.	.
Template Sequence		E	D	L	T	R	Y	R	E	M	S	Y	K	V	T	E	L	L	E	E	F	S	P	V	.	.	.	V	E	R	L	G	F	D	E	N	F	V	D	L	T	E	M	V	E	K	R	L	Q	Q	L	Q	S	D	E	L	S	A	V	T	V	S	G	H	V	Y	N	N	Q	S	I	N	L	L	D	V	L	H	I	R	L
Template Known Secondary structure																							S		.	.	.					T	T	T																T	S		S	S	G	G	G	G					S			T	T	S					T	T
Template Predicted Secondary structure																									.	.	.
Template SS confidence
		517	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.				540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.
				421	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.
Predicted Secondary structure		.	.
Query SS confidence		.	.
Query Sequence		.	.	A	K	I	I	A	E	R	M	R	K	N	V	E	L	L	T	G	F	S	N	R	Y	D	V	P	E	Q	M	T	I	S	I	G	T	V
Query Conservation		.	.
Alig confidence		.	.															.	.	.	.	.	.	.	.	.	.
Template Conservation																		.	.	.	.	.	.	.	.	.	.
Template Sequence		L	V	G	S	Q	I	A	A	E	M	R	E	A	M	Y	N	.	.	.	.	.	.	.	.	.	.	Q	L	G	L	T	G	C	A	G	V	A
Template Known Secondary structure																		.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.
Template SS confidence
		594	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.											610	.	.	.	.	.	.	.	.	.	620

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions