Job Description P52095 Confidence 99.81% Date Thu Jan 5 12:05:15 GMT 2012 Rank 60 Aligned Residues 300 % Identity 14% Template d2ch1a1 SCOP info PLP-dependent transferase-like PLP-dependent transferases Cystathionine synthase-like Resolution 2.4

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		196	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.			.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.			.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.
Predicted Secondary structure																		.	.																																					.	.
Query SS confidence																		.	.																																					.	.
Query Sequence		P	H	L	E	A	E	E	Y	I	A	R	T	F	G	A	E	.	.	Q	S	Y	I	V	T	N	G	T	S	T	S	N	K	I	V	G	M	Y	A	A	P	S	G	S	T	L	L	I	D	R	N	C	H	K	S	.	.	L	A	H	L	L	M	M	N	D	V	V	P	V	W	L	K	P	T	R	N	A	L	G	I
Query Conservation																		.	.																																					.	.
Alig confidence																		.	.																																					.	.																						.	.	.
Template Conservation																																																																															.	.	.
Template Sequence		T	M	D	E	V	K	D	G	L	R	Y	I	F	Q	T	E	N	R	A	T	M	C	V	S	G	S	A	H	A	G	M	E	A	M	L	S	N	L	L	E	E	G	D	R	V	L	I	A	V	N	G	I	W	A	E	R	A	V	E	M	S	E	R	Y	G	A	D	V	R	T	I	E	G	P	P	D	R	.	.	.
Template Known Secondary structure															T				S						S	S																T	T								S	S													T	T										T	T	S	.	.	.
Template Predicted Secondary structure																																																																															.	.	.
Template SS confidence
		52	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.
		272	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.		.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.			.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.
Predicted Secondary structure																																					.																					.	.
Query SS confidence																																					.																					.	.
Query Sequence		L	G	G	I	P	R	R	E	F	T	R	D	S	I	E	E	K	V	A	A	T	T	Q	A	Q	W	P	V	H	A	V	I	T	N	S	.	T	Y	D	G	L	L	Y	N	T	D	W	I	K	Q	T	L	D	V	P	S	.	.	I	H	F	D	S	A	W	V	P	Y	T	H	F	H	P	I	Y	Q	G	K	S	G
Query Conservation																																					.																					.	.
Alig confidence		.	.	.	.	.	.	.																			.	.	.	.							.																					.	.																	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.																			.	.	.	.																																														.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	P	F	S	L	E	T	L	A	R	A	I	E	L	H	Q	P	K	C	.	.	.	.	L	F	L	T	H	G	D	S	S	S	G	L	L	Q	P	L	E	G	V	G	Q	I	C	H	Q	H	D	C	L	L	I	V	D	A	V	A	S	L	C	G	V	P	F	Y	M	.	.	.	.	.	.
Template Known Secondary structure		.	.	.	.	.	.	.																	S		.	.	.	.					S			T	T	T	T						T	T								T	T								T	T	T	B	T	T	B				T	.	.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.																			.	.	.	.																																														.	.	.	.	.	.
Template SS confidence
									129	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.					.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
		349	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.																	.	.	.	.	.	.	390	.	.	.	.	.	.	.						.	.	400	.	.	.	.	.	.	.
Predicted Secondary structure																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.
Query SS confidence																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.
Query Sequence		M	S	G	E	R	V	A	G	K	V	I	F	E	T	Q	S	T	H	K	M	L	A	A	L	S	Q	A	S	L	I	H	I	K	G	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	D	E	E	A	F	N	E	A	F	M	M	H	T	.	.	.	.	.	T	T	S	P	S	Y	P	I	V	A
Query Conservation																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.
Alig confidence		.	.	.	.	.															.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.
Template Conservation		.	.	.	.	.															.
Template Sequence		.	.	.	.	.	D	K	W	E	I	D	A	V	Y	T	G	A	Q	V	.	L	G	A	P	P	G	I	T	P	I	S	I	S	P	K	A	L	D	V	I	R	N	R	R	T	K	S	K	V	F	Y	W	D	L	L	L	L	G	N	Y	W	G	C	Y	D	E	P	K	R	Y	H	H	T	V	A	S	N	L	I	F
Template Known Secondary structure		.	.	.	.	.	T	T	T	T											.					S	S																T		S	S			S		G	G	G									T	T		S	S	S
Template Predicted Secondary structure		.	.	.	.	.															.
Template SS confidence
							192	.	.	.	.	.	.	.	200	.	.	.	.	.		.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.
		408	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	V	E	T	A	A	A	M	L	R	G	N	P	G	K	R	L	I	N	R	S	V	E	R	A	L	H	F	R	K	E	V	Q	R	L	R	E	E	S	D	G	W	F	F	D	I	W	Q	P	P	Q	V	D	E	A	E	C	W	P	V	A	P	G	E	Q	W	H	G	F	N	D	A	D	A	D	H	M	F	L	D
Query Conservation
Alig confidence																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	L	R	E	A	L	A	Q	I	A	E	E	G	L	E	N	Q	I	K	R	R	I	E	C	A	Q	I	L	Y	E	G	L	G	K	M	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	L	D	I	F	V	K	D	P	R	H	R	L
Template Known Secondary structure																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T			B	S	S		S	G	G	G	B
Template Predicted Secondary structure																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		267	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.																																	.	.	.	.	.	.	.	.	310	.	.	.	.
		488	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.		.	520	.	.	.	.	.	.					.	.	.	530	.	.	.	.	.		.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.
Predicted Secondary structure																																	.									.	.	.	.										.
Query SS confidence																																	.									.	.	.	.										.
Query Sequence		P	V	K	V	T	I	L	T	P	G	M	D	E	Q	G	N	M	S	E	E	G	I	P	A	A	L	V	A	K	F	L	.	D	E	R	G	I	V	V	E	.	.	.	.	K	T	G	P	Y	N	L	L	F	.	L	F	S	I	G	I	D	K	T	K	A	M	G	L	L	R	G	L	T	E	F	K	R	S	Y	D
Query Conservation																																	.									.	.	.	.										.
Alig confidence												.	.	.	.	.	.	.	.	.	.												.									.	.	.	.										.
Template Conservation												.	.	.	.	.	.	.	.	.	.
Template Sequence		P	T	V	T	G	I	M	I	P	K	.	.	.	.	.	.	.	.	.	.	G	V	D	W	W	K	V	S	Q	Y	A	M	N	N	F	S	L	E	V	Q	G	G	L	G	P	T	F	G	K	A	W	R	V	G	I	M	G	E	C	S	T	V	Q	K	I	Q	F	Y	L	Y	G	F	K	E	S	L	K	A	T	H
Template Known Secondary structure		T	T								T	.	.	.	.	.	.	.	.	.	.	T																B			B				G	G	G	T	T	T								G	G	G		S
Template Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.
Template SS confidence
		315	.	.	.	.	320	.	.	.	.											.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.
		562	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	D
Template Known Secondary structure		T	T
Template Predicted Secondary structure
Template SS confidence
		385	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions