Job Description P52095 Confidence 99.69% Date Thu Jan 5 12:05:15 GMT 2012 Rank 102 Aligned Residues 289 % Identity 16% Template d2c0ra1 SCOP info PLP-dependent transferase-like PLP-dependent transferases GABA-aminotransferase-like Resolution 1.2

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		196	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.				.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.			.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270
Predicted Secondary structure																				.	.	.																																			.	.
Query SS confidence																				.	.	.																																			.	.
Query Sequence		P	H	L	E	A	E	E	Y	I	A	R	T	F	G	A	E	Q	S	.	.	.	Y	I	V	T	N	G	T	S	T	S	N	K	I	V	G	M	Y	A	A	P	S	G	S	T	L	L	I	D	R	N	C	H	K	S	.	.	L	A	H	L	L	M	M	N	D	V	V	P	V	W	L	K	P	T	R	N	A	L	G
Query Conservation																				.	.	.																																			.	.
Alig confidence																				.	.	.																																			.	.
Template Conservation
Template Sequence		V	H	N	E	A	Q	A	R	L	L	A	L	L	G	N	P	T	G	Y	K	V	L	F	I	Q	G	G	A	S	T	Q	F	A	M	I	P	M	N	F	L	K	E	G	Q	T	A	N	Y	V	M	T	G	S	W	A	S	K	A	L	K	E	A	K	L	I	G	D	T	H	V	A	A	S	S	E	A	S	N	Y	M
Template Known Secondary structure														T	T			S	S							S	S																T	T									S														S									G	G	G	T	T
Template Predicted Secondary structure
Template SS confidence
		50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.
		271	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.		.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.			.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.
Predicted Secondary structure																																						.																					.	.
Query SS confidence																																						.																					.	.
Query Sequence		I	L	G	G	I	P	R	R	E	F	T	R	D	S	I	E	E	K	V	A	A	T	T	Q	A	Q	W	P	V	H	A	V	I	T	N	S	.	T	Y	D	G	L	L	Y	N	T	D	W	I	K	Q	T	L	D	V	P	S	.	.	I	H	F	D	S	A	W	V	P	Y	T	H	F	H	P	I	Y	Q	G	K	S
Query Conservation																																						.																					.	.
Alig confidence						.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.									.	.	.	.	.								.	.									.	.							.	.	.	.	.
Template Conservation						.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.																		.	.							.	.	.	.	.
Template Sequence		T	L	P	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	Q	E	I	Q	L	Q	D	N	A	A	Y	L	H	L	T	S	N	E	T	I	E	G	A	Q	F	K	.	.	.	.	.	A	F	P	D	T	G	S	V	P	L	I	G	D	M	S	S	D	.	.	I	L	S	R	P	F	.	.	.	.	.
Template Known Secondary structure		S				.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	G					T	T								S			T	T	T	T				S	.	.	.	.	.	S					T	T	S							T	T	T	.	.	T	T	S	S			.	.	.	.	.
Template Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.																		.	.							.	.	.	.	.
Template SS confidence
		130	.	.	.															.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160						.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.			.	.	180	.	.	.
		348	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.													.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.
Predicted Secondary structure																																							.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																							.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	M	S	G	E	R	V	A	G	K	V	I	F	E	T	Q	S	T	H	K	M	L	A	A	L	S	Q	A	S	L	I	H	I	K	G	E	Y	.	.	.	.	.	.	.	.	.	.	.	.	D	E	E	A	F	N	E	A	F	M	M	H	T	T	T	S	P	S	Y	P	I	V	A	S	V	E	T	A	A	A	M
Query Conservation																																							.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.																	.															.	.	.	.	.	.	.	.	.	.	.	.														.	.
Template Conservation		.	.	.	.	.	.																	.																																								.	.
Template Sequence		.	.	.	.	.	.	D	L	N	Q	F	G	L	V	Y	A	G	A	Q	K	N	L	.	G	P	S	G	V	T	V	V	I	V	R	E	D	L	V	A	E	S	P	K	H	L	P	T	M	L	R	Y	D	T	Y	V	K	N	N	S	L	Y	N	.	.	T	P	P	S	F	G	I	Y	M	V	N	E	V	L	K	W
Template Known Secondary structure		.	.	.	.	.	.		G	G	G		S						T	T	T	T	T	.			S	S								G	G	G	S	S	S			T	T	S		G	G	G								T	T	T		S	S	.	.
Template Predicted Secondary structure		.	.	.	.	.	.																	.																																								.	.
Template SS confidence
								184	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.			.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.
		416	.	.	.	420	.		.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.
Predicted Secondary structure								.
Query SS confidence								.
Query Sequence		L	R	G	N	P	G	.	K	R	L	I	N	R	S	V	E	R	A	L	H	F	R	K	E	V	Q	R	L	R	E	E	S	D	G	W	F	F	D	I	W	Q	P	P	Q	V	D	E	A	E	C	W	P	V	A	P	G	E	Q	W	H	G	F	N	D	A	D	A	D	H	M	F	L	D	P	V	K	V	T	I	L
Query Conservation								.
Alig confidence								.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	E	E	R	G	G	L	E	G	V	Q	Q	A	N	R	K	K	A	S	L	I	Y	D	A	I	D	Q	S	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	F	Y	R	G	C	V	D	V	D	S	R	S	D	M	N	I	T	F	R
Template Known Secondary structure					T	T																						T	S	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	S	S			S	S		G	G	G	B		S	S
Template Predicted Secondary structure																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		255	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.																																.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.
		495	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.			.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Predicted Secondary structure																																			.	.
Query SS confidence																																			.	.
Query Sequence		T	P	G	M	D	E	Q	G	N	M	S	E	E	G	I	P	A	A	L	V	A	K	F	L	D	E	R	G	I	V	V	E	K	.	.	T	G	P	Y	N	L	L	F	L	F	S	I	G	I	D	K	T	K	A	M	G	L	L	R	G	L	T	E	F	K	R	S	Y
Query Conservation																																			.	.
Alig confidence					.	.	.	.	.	.	.	.	.	.																					.	.
Template Conservation					.	.	.	.	.	.	.	.	.	.
Template Sequence		L	A	S	.	.	.	.	.	.	.	.	.	.	E	E	L	E	K	E	F	V	K	A	S	E	Q	E	G	F	V	G	L	K	G	H	R	S	V	G	G	L	R	A	S	I	Y	N	A	V	P	Y	E	S	C	E	A	L	V	Q	F	M	E	H	F	K	R	S	R
Template Known Secondary structure			S		.	.	.	.	.	.	.	.	.	.														T	T			S		B			T	T	T		S							T	T	S
Template Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.
Template SS confidence
		304	.	.											.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions