Job Description P52095 Confidence 99.88% Date Thu Jan 5 12:05:15 GMT 2012 Rank 25 Aligned Residues 323 % Identity 16% Template d1wyub1 SCOP info PLP-dependent transferase-like PLP-dependent transferases Glycine dehydrogenase subunits (GDC-P) Resolution 2.10

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		196	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.										.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.
Predicted Secondary structure																																							.	.	.	.	.	.	.	.	.
Query SS confidence																																							.	.	.	.	.	.	.	.	.
Query Sequence		P	H	L	E	A	E	E	Y	I	A	R	T	F	G	A	E	Q	S	Y	I	V	T	N	G	T	S	T	S	N	K	I	V	G	M	Y	A	A	.	.	.	.	.	.	.	.	.	P	S	G	S	T	L	L	I	D	R	N	C	H	K	S	L	A	H	L	L	M	M	N	D	V	V	P	V	W	L	K	P	T	R
Query Conservation																																							.	.	.	.	.	.	.	.	.
Alig confidence																																							.	.	.	.	.	.	.	.	.																																	.	.
Template Conservation																																																																																.	.
Template Sequence		L	M	W	E	L	G	E	Y	L	K	A	L	T	G	M	D	A	I	T	L	E	P	A	A	G	A	H	G	E	L	T	G	I	L	I	I	R	A	Y	H	E	D	R	G	E	G	R	T	R	R	V	V	L	V	P	D	S	A	H	G	S	N	P	A	T	A	S	M	A	G	Y	Q	V	R	E	I	P	S	.	.
Template Known Secondary structure															T		S							S	S																			T	T		T	T	T								T	T	S		T									T	T								B	.	.
Template Predicted Secondary structure																																																																																.	.
Template SS confidence
		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
		267	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.		.	.	.	.	.	.	320	.	.	.	.	.	.			.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.
Predicted Secondary structure																																																	.														.	.
Query SS confidence																																																	.														.	.
Query Sequence		N	A	L	G	I	L	G	G	I	P	R	R	E	F	T	R	D	S	I	E	E	K	V	A	A	T	T	Q	A	Q	W	P	V	H	A	V	I	T	N	S	T	Y	D	G	L	L	Y	.	N	T	D	W	I	K	Q	T	L	D	V	P	S	.	.	I	H	F	D	S	A	W	V	P	Y	T	H	F	H	P	I	Y
Query Conservation																																																	.														.	.
Alig confidence								.	.	.	.	.	.	.	.										.	.							.	.	.														.														.	.														.	.	.	.
Template Conservation								.	.	.	.	.	.	.	.										.	.							.	.	.																																											.	.	.	.
Template Sequence		G	P	E	G	E	V	.	.	.	.	.	.	.	.	D	L	E	A	L	K	R	E	L	.	.	G	P	H	V	A	A	.	.	.	L	M	L	T	N	P	N	T	L	G	L	F	E	R	R	I	L	E	I	S	R	L	C	K	E	A	G	V	Q	L	Y	Y	D	G	A	N	L	N	A	I	M	G	.	.	.	.
Template Known Secondary structure			T	T	S	S	B	.	.	.	.	.	.	.	.										.	.	S	T	T				.	.	.					S	S		T	T	S				T	T												T							G	G	G	G	G	G	T	T	T	.	.	.	.
Template Predicted Secondary structure								.	.	.	.	.	.	.	.										.	.							.	.	.																																											.	.	.	.
Template SS confidence
		186	.	.	.	190	.									.	.	.	.	.	.	.	.	200			.	.	.	.	.	.				.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
		344	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.																							.	.	.	.	.	.	400	.
Predicted Secondary structure																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	G	K	S	G	M	S	G	E	R	V	A	G	K	V	I	F	E	T	Q	S	T	H	K	M	L	A	A	L	S	Q	A	S	L	I	H	I	K	G	E	Y	D	E	E	A	F	N	E	A	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	M	M	H	T	T	T	S	P
Query Conservation																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	W	A	R	P	G	D	M	G	F	D	V	V	H	L	N	L	H	K	T	F	T	V	P	H	G	G	G	G	P	G	S	G	P	V	G	V	K	A	H	L	A	P	Y	L	P	V	P	L	V	E	R	G	E	E	G	F	Y	L	D	F	D	R	P	K	S	I	G	R	V	R	S	F	Y	G
Template Known Secondary structure		.	.	.	.	.	.	T							T		S						T	T	T	T	T					T	T	S											G	G	G	G	G	G			S							S	S									T	T					S	S	S	T	T	S
Template Predicted Secondary structure		.	.	.	.	.	.
Template SS confidence
								249	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.
		402	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	Y	P	I	V	A	S	V	E	T	A	A	A	M	L	R	G	N	P	G	K	R	L	I	N	R	S	V	E	R	A	L	H	F	R	K	E	V	Q	R	L	R	E	E	S	D	G	W	F	F	D	I	W	Q	P	P	Q	V	D	E	A	E	C	W	P	V	A	P	G	E	Q	W	H	G	F	N	D	A	D	A
Query Conservation
Alig confidence																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	F	L	A	L	V	R	A	W	A	Y	I	R	T	L	G	L	E	G	L	K	K	A	A	A	L	A	V	L	N	A	R	Y	L	K	E	L	L	K	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		323	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.
		482	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.						.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.
Predicted Secondary structure																																														.	.	.	.	.
Query SS confidence																																														.	.	.	.	.
Query Sequence		D	H	M	F	L	D	P	V	K	V	T	I	L	T	P	G	M	D	E	Q	G	N	M	S	E	E	G	I	P	A	A	L	V	A	K	F	L	D	E	R	G	I	V	V	.	.	.	.	.	E	K	T	G	P	Y	N	L	L	F	L	F	S	I	G	I	D	K	T	K	A	M	G	L	L	R	G	L	T	E	F
Query Conservation																																														.	.	.	.	.
Alig confidence		.	.	.	.	.																																								.	.	.	.	.
Template Conservation		.	.	.	.	.
Template Sequence		.	.	.	.	.	K	G	Y	R	V	P	Y	D	G	P	S	M	H	E	F	V	A	Q	P	P	E	G	F	R	A	L	D	L	A	K	G	L	L	E	L	G	F	H	P	P	T	V	Y	F	P	L	I	V	K	E	A	L	M	V	E	P	T	E	T	E	A	K	E	T	L	E	A	F	A	E	A	M	G	A	L
Template Known Secondary structure		.	.	.	.	.	T	T		B		S	S		S	S			S					B		S	T	T													T	T							S		S	T	T	S	T	T								T	T	S
Template Predicted Secondary structure		.	.	.	.	.
Template SS confidence
							363	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.
		557	.	.	560	.	.				.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.
Predicted Secondary structure								.	.	.
Query SS confidence								.	.	.
Query Sequence		K	R	S	Y	D	L	.	.	.	N	L	R	I	K	N	M	L	P	D	L	Y	A	E	D	P	D	F	Y	R	N	M	R	I	Q	D
Query Conservation								.	.	.
Alig confidence								.	.	.
Template Conservation
Template Sequence		L	K	K	P	K	E	W	L	E	N	A	P	Y	S	T	P	V	R	R	L	D	E	L	R	A	N	K	H	P	K	L	T	Y	F	D
Template Known Secondary structure			T	S							T				S	S	S	S		S									S				S	S
Template Predicted Secondary structure
Template SS confidence
		438	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.

No model constructed - rank, confidence too low