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Job DescriptionP52095
Confidence99.81%DateThu Jan 5 12:05:15 GMT 2012
Rank61Aligned Residues366
% Identity17%Templated1pmma_
SCOP infoPLP-dependent transferase-like PLP-dependent transferases Pyridoxal-dependent decarboxylase
Resolution2.00

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   134.....140.........150..... ....160.........170.........180.........190.........200.........210
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Query Sequence  KALFTYVKERKYTFCTPGHMGG. . . TAYQKSPVGCLFYDFFGGNTLKADVSISVTELGSLLDHTGPHLEAEEYIARTFGA
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Template Sequence  DVAFQIINDELYLDGNARQNLATFCQTWDDENVHKLMDLSINKNWIDKEEYPQS. . . . . . . . . AAIDLRCVNMVADLWHA
Template Known Secondary structure  GGGS

GGGB
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TTT
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   40.........50.........60.........70.........80.........90... ......100.........110
 
   211.. ......220.........230. ........240.........250.........260.........270..
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Query Sequence  EQS. . . . . . YIVTNGTSTSNKIVGMYA. . . . . . . . . . . . APSGSTLLIDRNCHKSLAHLLMMNDVVPVWLKPTRNALGIL
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Template Sequence  PAPKNGQAVGTNTIGSSEACMLGGMAMKWRWRKRMEAAGKPTDKPNLVCGPVQICWHKFARYWDVELREIPMRPGQLFM.
Template Known Secondary structure 


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BTTB
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   111........120.........130.........140.........150.........160.........170.........180.........
 
   273......280.........290.........300...... ...310.........320...... ...330.........340...
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Query Sequence  GGIPRREFTRDSIEEKVAATTQAQWPVHAVITNS. TYDGLLYNTDWIKQTLDVPS. . . . . . . . IHFDSAWVPYTHFHPIY
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Template Sequence  . . . . . . . . DPKRMIEACDENTIG. . . . . VVPTFGVTYTGNYEFPQPLHDALDKFQADTGIDIDMHIDAASGGFLAPFVA.
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TTGGGT
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   190.........200.... .....210.........220.........230.........240.........250.....
 
   344.....350.........360.........370.........380... ......390.........400... ......410....
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Query Sequence  QGKSGMSGERVAGKVIFETQSTHKMLAALSQASLIHIKGE. YDEEAFNEAFMMHTTTSPSY. . . . . . . . PIVASVETAAA
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Template Sequence  . . . PDIVWDFRLPRVKSISASGHKFGLAPLGCGWVIWRDEEALPQELVFNVDYLGGQIGTFAINFSRPAGQVIAQYYEFL
Template Known Secondary structure  ...TT


STTSTTTTTTT


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SSGGGS
GGG
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   256...260.........270.........280.........290.........300.........310.........320.........330..
 
   415....420.........430.........440.........450.........460.........470.........480.........490....
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Query Sequence  MLRGNPGKRLINRSVERALHFRKEVQRLREESDGWFFDIWQPPQVDEAECWPVAPGEQWHGFNDADADHMFLDPVKVTIL
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Template Sequence  RLGREGYTKVQNASYQVAAYLADEIAKLG. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . PYEFICTGRPDEGIPAVCFK
Template Known Secondary structure  TTS...............................


TTTBSS
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   333......340.........350.........360. ........370.........380.
 
   495....500.........510.........520...... ...530.........540.........550.........560...
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Query Sequence  TPGMDEQGNMSEEGIPAALVAKFLDERGIVVE. . . . . . . KTGPYNLLFLFSIGIDKTKAMGLLRGLTEFKRSYDLN
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Template Sequence  LKDG. . . . . . EDPGYTLYDLSERLRLRGWQVPAFTLGGEATDIVVMRIMCRRGFEMDFAELLLEDYKASLKYLSDH
Template Known Secondary structure 
TT......


SS
TTT
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   382... ....390.........400.........410.........420.........430.........440.........450.
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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