Job Description P52095 Confidence 99.52% Date Thu Jan 5 12:05:15 GMT 2012 Rank 171 Aligned Residues 305 % Identity 14% Template d1p3wa_ SCOP info PLP-dependent transferase-like PLP-dependent transferases Cystathionine synthase-like Resolution 2.10

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		197	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.		.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.					.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.				.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.
Predicted Secondary structure																			.																					.	.	.	.																			.	.	.
Query SS confidence																			.																					.	.	.	.																			.	.	.
Query Sequence		H	L	E	A	E	E	Y	I	A	R	T	F	G	A	E	Q	S	.	Y	I	V	T	N	G	T	S	T	S	N	K	I	V	G	M	Y	A	A	P	.	.	.	.	S	G	S	T	L	L	I	D	R	N	C	H	K	S	L	A	H	L	.	.	.	L	M	M	N	D	V	V	P	V	W	L	K	P	T	R	N	A
Query Conservation																			.																					.	.	.	.																			.	.	.
Alig confidence																			.																					.	.	.	.																			.	.	.
Template Conservation
Template Sequence		V	D	I	A	R	N	Q	I	A	D	L	V	G	A	D	P	R	E	I	V	F	T	S	G	A	T	E	S	D	N	L	A	I	K	G	A	A	N	F	Y	Q	K	K	G	K	H	I	I	T	S	K	T	E	H	K	A	V	L	D	T	C	R	Q	L	E	R	E	G	F	E	V	T	Y	L	A	P	Q	R	N	G
Template Known Secondary structure														T			G	G	G					S	S																	G	G	G								T	T	S														T	T										T	T	S
Template Predicted Secondary structure
Template SS confidence
		51	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130
		269	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.		.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.			.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.
Predicted Secondary structure																																								.																					.	.
Query SS confidence																																								.																					.	.
Query Sequence		L	G	I	L	G	G	I	P	R	R	E	F	T	R	D	S	I	E	E	K	V	A	A	T	T	Q	A	Q	W	P	V	H	A	V	I	T	N	S	.	T	Y	D	G	L	L	Y	N	T	D	W	I	K	Q	T	L	D	V	P	S	.	.	I	H	F	D	S	A	W	V	P	Y	T	H	F	H	P	I	Y	Q	G
Query Conservation																																								.																					.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.							.																					.	.																	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.																																														.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	I	I	D	L	K	E	L	E	A	A	M	R	D	D	T	I	L	.	.	.	.	.	V	S	I	M	H	V	N	N	E	I	G	V	V	Q	D	I	A	A	I	G	E	M	C	R	A	R	G	I	I	Y	H	V	D	A	T	Q	S	V	G	K	L	P	I	D	L	.	.	.
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.													T	T				.	.	.	.	.					S	B		T	T	T			B														T								T	T	T	B	T	T	B				T	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.																																														.	.	.
Template SS confidence
												131	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.						.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
		346	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.						.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Predicted Secondary structure																																								.	.	.	.	.
Query SS confidence																																								.	.	.	.	.
Query Sequence		K	S	G	M	S	G	E	R	V	A	G	K	V	I	F	E	T	Q	S	T	H	K	M	L	A	A	L	S	Q	A	S	L	I	H	I	K	G	E	.	.	.	.	.	Y	D	E	E	A	F	N	E	A	F	M	M	H	T	T	T	S	P	S	Y	P	I	V	A	S	V	E	T	A	A	A	M	L	R	G	N	P
Query Conservation																																								.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.																					.										.	.	.	.	.																																					.
Template Conservation		.	.	.	.	.	.	.	.																					.																																																			.
Template Sequence		.	.	.	.	.	.	.	.	S	Q	L	K	V	D	L	M	S	F	S	G	H	K	I	Y	G	P	K	G	.	I	G	A	L	Y	V	R	R	K	P	R	V	R	I	E	A	Q	M	H	G	G	G	H	E	R	G	M	R	S	G	T	L	P	V	H	Q	I	V	G	M	G	E	A	Y	R	I	A	K	E	E	.
Template Known Secondary structure		.	.	.	.	.	.	.	.	T	T	S			S						S	T	T	T	T	S		S	S	.								B	T	T	B						S	S		S	S		T	T	T	T	T	S		S																					.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.																					.																																																			.
Template SS confidence
										193	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.		.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.
		421	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500
Predicted Secondary structure
Query SS confidence
Query Sequence		G	K	R	L	I	N	R	S	V	E	R	A	L	H	F	R	K	E	V	Q	R	L	R	E	E	S	D	G	W	F	F	D	I	W	Q	P	P	Q	V	D	E	A	E	C	W	P	V	A	P	G	E	Q	W	H	G	F	N	D	A	D	A	D	H	M	F	L	D	P	V	K	V	T	I	L	T	P	G	M	D	E
Query Conservation
Alig confidence																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.
Template Conservation																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.
Template Sequence		M	A	T	E	M	E	R	L	R	G	L	R	N	R	L	W	N	G	I	K	D	I	E	E	V	Y	L	N	G	D	L	E	H	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	P	N	I	L	N	V	S	F	N	.	.	.	.
Template Known Secondary structure																			T	T	T	T	S	T	T					S		T	T	T	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T							T	.	.	.	.
Template Predicted Secondary structure																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.
Template SS confidence
		263	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.																																	.	.	.	300	.	.	.	.	.	.
		501	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530																.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.
Predicted Secondary structure																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	G	N	M	S	E	E	G	I	P	A	A	L	V	A	K	F	L	D	E	R	G	I	V	V	E	K	T	G	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	N	L	L	F	L	F	S	I	G	I	D	K	T	K	A	M	G	L	L	R	G	L	T	E	F	K	R	S	Y	D	L	N	L	R
Query Conservation																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	Y	V	E	G	E	S	L	I	M	A	L	K	D	L	A	V	S	S	G	S	A	E	P	S	Y	V	L	R	A	L	G	L	N	D	E	L	A	H	S	S	I	R	F	S	L	G	R	F	T	T	E	E	E	I	D	Y	T	I	E	L	V	R	K	S	I	G	R	L	R	D	L	S	P
Template Known Secondary structure		.	.	.	.	.	.	.	T	S									T	T	T				B														T								T								T	T																							S
Template Predicted Secondary structure		.	.	.	.	.	.	.
Template SS confidence
									307	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.
		566	.	.	.	570	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	K	N	M	L	P	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	W	E	M	Y	K	Q
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		386	.	.	.	390	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions