Job Description P52095 Confidence 99.08% Date Thu Jan 5 12:05:15 GMT 2012 Rank 223 Aligned Residues 311 % Identity 11% Template d1ohwa_ SCOP info PLP-dependent transferase-like PLP-dependent transferases GABA-aminotransferase-like Resolution 2.30

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		193	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.			.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.																													.	.	.	.	.	.	.	.	240	.	.
Predicted Secondary structure																		.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																		.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		H	T	G	P	H	L	E	A	E	E	Y	I	A	R	T	F	.	.	G	A	E	Q	S	Y	I	V	T	N	G	T	S	T	S	N	K	I	V	G	M	Y	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	P	S	G	S	T	L	L	I	D	R
Query Conservation																		.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																		.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	E	N	F	V	E	K	L	R	E	S	L	L	S	V	A	P	K	G	M	S	Q	L	I	T	M	A	C	G	S	C	S	N	E	N	A	F	K	T	I	F	M	W	Y	R	S	K	E	R	G	Q	S	A	F	S	K	E	E	L	E	T	C	M	I	N	Q	A	P	G	C	P	D	Y	S	I	L	S	F	M	G
Template Known Secondary structure			T	T								T	G	G	G	G			T	T								S	S																						T	T													T	T		T	T	T	S									T	T
Template Predicted Secondary structure
Template SS confidence
		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.																.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.
Predicted Secondary structure																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		N	C	H	K	S	L	A	H	L	L	M	M	N	D	V	V	P	V	W	L	K	P	T	R	N	A	L	G	I	L	G	G	I	P	R	R	E	F	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	D	S	I	E	E	K	V	A	A	T	T	Q	A	Q	W	P	V	H	A	V	I	T	N	S	T
Query Conservation																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	F	H	G	R	T	M	G	C	L	A	T	T	H	S	K	A	I	H	K	I	D	I	P	S	F	D	W	P	I	A	P	F	P	R	L	K	Y	P	L	E	E	F	V	K	E	N	Q	Q	E	E	A	R	C	L	E	E	V	E	D	L	I	V	K	Y	R	K	K	K	K	T	V	A	G	I	I	V	E	P	I
Template Known Secondary structure						S	S						T			S						T	T																S	S	G	G	G																										T	T										S	S
Template Predicted Secondary structure
Template SS confidence
		188	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.
		308	.			310	.	.	.	.					.	.	.	.	.	320	.	.	.	.	.	.			.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.
Predicted Secondary structure				.	.						.	.	.	.													.	.
Query SS confidence				.	.						.	.	.	.													.	.
Query Sequence		Y	D	.	.	G	L	L	Y	N	.	.	.	.	T	D	W	I	K	Q	T	L	D	V	P	S	.	.	I	H	F	D	S	A	W	V	P	Y	T	H	F	H	P	I	Y	Q	G	K	S	G	M	S	G	E	R	V	A	G	K	V	I	F	E	T	Q	S	T	H	K	M	L	A	A	L	S	Q	A	S	L	I	H
Query Conservation				.	.						.	.	.	.													.	.
Alig confidence				.	.						.	.	.	.													.	.														.	.	.	.																						.	.
Template Conservation																																										.	.	.	.																						.	.
Template Sequence		Q	S	E	G	G	D	N	H	A	S	D	D	F	F	R	K	L	R	D	I	S	R	K	H	G	C	A	F	L	V	D	E	V	Q	T	G	G	G	S	T	.	.	.	.	G	K	F	W	A	H	E	H	W	G	L	D	D	P	A	D	V	M	T	F	S	.	.	K	K	M	M	T	G	G	F	F	H	K	E	E
Template Known Secondary structure		B		T	T	T		B																	T	T								T	T	T		S	S	T	T	.	.	.	.	S	S	S	S	G	G	G	G	G			S	S			S						.	.	G	G	G	S	S							G	G
Template Predicted Secondary structure																																										.	.	.	.																						.	.
Template SS confidence
		268	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.					.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.			.	330	.	.	.	.	.	.	.	.	.	340	.
		380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	K	G	E	Y	D	E	E	A	F	N	E	A	F	M	M	H	T	T	T	S	P	S	Y	P	I	V	A	S	V	E	T	A	A	A	M	L	R	G	N	P	G	K	R	L	I	N	R	S	V	E	R	A	L	H	F	R	K	E	V	Q	R	L	R	E	E	S	D	G	W	F	F	D	I	W	Q	P	P	Q	V
Query Conservation
Alig confidence								.	.	.	.	.	.	.																										.	.	.																																				.	.	.	.
Template Conservation								.	.	.	.	.	.	.																										.	.	.																																				.	.	.	.
Template Sequence		F	R	P	N	A	P	.	.	.	.	.	.	.	Y	R	I	F	N	T	W	L	G	D	P	S	K	N	L	L	L	A	E	V	I	N	I	I	K	.	.	.	R	E	D	L	L	S	N	A	A	H	A	G	K	V	L	L	T	G	L	L	D	L	Q	A	R	Y	P	Q	F	I	S	R	V	R	G	.	.	.	.
Template Known Secondary structure		G	S		S	S	T	.	.	.	.	.	.	.	T	S	S			S		S	S																	.	.	.		T	T																								T	T	T							.	.	.	.
Template Predicted Secondary structure								.	.	.	.	.	.	.																										.	.	.																																				.	.	.	.
Template SS confidence
		342	.	.	.	.	.								.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.				.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.
		460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	E	A	E	C	W	P	V	A	P	G	E	Q	W	H	G	F	N	D	A	D	A	D	H	M	F	L	D	P	V	K	V	T	I	L	T	P	G	M	D	E	Q	G	N	M	S	E	E	G	I	P	A	A	L	V	A	K	F	L	D	E	R	G	I	V	V	E	K	T	G	P	Y	N	L	L	F	L	F	S	I
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	G	T	F	C	S	F	D	T	P	D	.	.	.	.	.	.	.	.	.	.	E	S	I	R	N	K	L	I	S	I	A	R	N	K	G	V	M	L	G	G	C	G	D	K	S	I	R	F	R	P	T	L
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T							S	S	.	.	.	.	.	.	.	.	.	.														T	T							T	T	T								T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.
Template SS confidence
																													408	.	410	.	.	.	.	.	.	.	.											.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450
		540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Predicted Secondary structure
Query SS confidence
Query Sequence		G	I	D	K	T	K	A	M	G	L	L	R	G	L	T	E	F	K	R	S	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	F	R	D	H	H	A	H	L	F	L	N	I	F	S	D	I	L	A	D	F
Template Known Secondary structure		T																			T
Template Predicted Secondary structure
Template SS confidence
		451	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions