Return to main results Retrieve Phyre Job Id

Job DescriptionP52095
Confidence99.56%DateThu Jan 5 12:05:15 GMT 2012
Rank154Aligned Residues368
% Identity12%Templated1gdea_
SCOP infoPLP-dependent transferase-like PLP-dependent transferases AAT-like
Resolution1.80

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   120.........130.........140.........150.........160.........170.........180.........190.........
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Query Sequence  YTDEYLDNITPPFTKALFTYVKERKYTFCTPGHMGGTAYQKSPVGCLFYDFFGGNTLKADVSISVTELGSLLDHTGPHLE
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Template Sequence  ALSDRLELVSASEIRKLFDIAAGMKDVISL. . . . . GIGEPDFDTPQHIKEYAKEALDK. . . . . . . . GLTHYGPNIGL. LE
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   2.......10.........20.........30. ........40.........50.... .....60..... ..
 
   200.........210.. .......220.........230.........240.........250.........260.........270.
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Query Sequence  AEEYIARTFGAEQ. . . . . . . . SYIVTNGTSTSNKIVGMYAAPSGSTLLIDRNCHKSLAHLLMMNDVVPVWLKPTRNALGI
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Template Sequence  LREAIAEKLKKQNGIEADPKTEIMVLLGANQAFLMGLSAFLKDGEEVLIPTPAFVSYAPAVILAGGKPVEVPTYEEDEFR
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TTTSSSTTTTT

TT
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TTT


GGGTT
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   68.70.........80.........90.........100.........110.........120.........130.........140.......
 
   272.......280.........290.........300.........310.... .....320...... ...330.........340......
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Query Sequence  LGGIPRREFTRDSIEEKVAATTQAQWPVHAVITNSTYDGLLYN. . . TDWIKQTLDVPS. . IHFDSAWVPYTHFHPIYQGK
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Template Sequence  L. . . . . . . . NVDELKKYVTDKTRAL. . . . IINSPCNPTGAVLTKKDLEEIADFVVEHDLIVISDEVYE. HFIYDD. . ARH
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   148 .150.........160.... .....170.........180.........190.........200... ...... 210..
 
   347..350.........360.........370.........380.........390.........400.........410.........420......
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Query Sequence  SGMSGERVAGKVIFETQSTHKMLAALSQASLIHIKGEYDEEAFNEAFMMHTTTSPSYPIVASVETAAAMLRGNPGKRLIN
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Template Sequence  YSIASLDGMFERTITVNGFSKTFAMTGWRLGFVAAPSWIIERMVKFQMYNATCPVTFIQYAAAKALKDERSWKAVEEMRK
Template Known Secondary structure 

GGGSTT
GGGSTTTTT
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   213......220.........230.........240.........250.........260.........270.........280.........290..
 
   427..430.........440.........450.........460.........470.........480.........490.........500......
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Query Sequence  RSVERALHFRKEVQRLREESDGWFFDIWQPPQVDEAECWPVAPGEQWHGFNDADADHMFLDPVKVTILTPGMDEQGNMSE
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Template Sequence  EYDRRRKLVWKRLNEMG. . . . . . . LPTVKPK. . . . . . . . . . . . . . . . . . . . . . . . . . . . . GAFYIFPRIRDTGLTSKK. .
Template Known Secondary structure  TT.......






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   293......300......... 310...... ...320.........330....
 
   507..510.........520.........530.... .....540.........550.........560
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Query Sequence  EGIPAALVAKFLDERGIVVEKTGPYNLL. . . . FLFSIGIDKTKAMGLLRGLTEFKRSY
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Template Sequence  . . . . . . FSELMLKEARVAVVPGSAFGKAGEGYVRISYATAYEKLEEAMDRMERVLKER
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GGGG
GGGTTB

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   335....340.........350.........360.........370.........380......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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