Return to main results Retrieve Phyre Job Id

Job DescriptionP52095
Confidence100.00%DateThu Jan 5 12:05:15 GMT 2012
Rank12Aligned Residues144
% Identity28%Templated1c4ka3
SCOP infoOrnithine decarboxylase C-terminal domain Ornithine decarboxylase C-terminal domain Ornithine decarboxylase C-terminal domain
Resolution2.70

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   564.....570.........580.........590.........600.........610 .........620.........630.........640.
Predicted Secondary structure 





































..














Query SS confidence 














































. .






























Query Sequence  LRIKNMLPDLYAEDPDFYRNMRIQDLAQGIHKLIRKHDLPGLMLRAF. . DTLPEMIMTPHQAWQRQIKGEVETIALEQLV
Query Conservation                        
                        ..   
   


 

         
 
 
 

 
Alig confidence 














































..






























Template Conservation 


 



 
     
 
  
 
 


  

   
           
     

  


 

     
   
 
 
 

 
Template Sequence  APLKQVLPSIYAANEERYNGYTIRELCQELHDFYKNNNTFTYQKRLFLREFFPEQGMLPYEARQEFIRNHNKLVPLNKIE
Template Known Secondary structure 
B
TTSTTTSTT
BTTTTTSGGG

SS
TT
TTT
T
Template Predicted Secondary structure 




















Template SS confidence 















































































   570.........580.........590.........600.........610.........620.........630.........640.........
 
   642.......650.........660.........670.........680.........690.........700.........710
Predicted Secondary structure 





























Query SS confidence 




































































Query Sequence  GRVSANMILPYPPGVPLLMPGEMLTKESRTVLDFLLMLCSVGQHYPGFETDIHGAKQDEDGVYRVRVLK
Query Conservation 





 
 








 


 

 
   

 

  
        
   

 
      
   
   
Alig confidence 


























...






































Template Conservation 





 
 








 


 

  ... 
 

  
   
  



  

 

         
    
Template Sequence  GEIALEGALPYPPGVFCVAPGEKWSET. . . AVKYFTILQDGINNFPGFAPEIQGVYFKQEGDKVVAYGE
Template Known Secondary structure  TSBBSS
BTTT
S
SB
TT

...STTS


SSTT
Template Predicted Secondary structure 












...













Template SS confidence 




































































   650.........660.........670...... ...680.........690.........700.........710.....
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions