Return to main results Retrieve Phyre Job Id

Job DescriptionP52095
Confidence99.59%DateThu Jan 5 12:05:15 GMT 2012
Rank145Aligned Residues339
% Identity11%Templated1ax4a_
SCOP infoPLP-dependent transferase-like PLP-dependent transferases Beta-eliminating lyases
Resolution2.10

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   188.190.........200.........210.........220.........230.........240..... ....250.........260
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Query Sequence  GSLLDHTGPHLEAEEYIARTFGAEQSYIVTNGTSTSNKIVGMYAAPSGSTLLIDRNCH. . . . . . . KSLAHLLMMNDVVPV
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Template Sequence  DEAYAGSRNYYDLKDKAKELFNYDYIIPAHQG. RGAENILFPVLLKYKQKEGKAKNPVFISNFHFDTTAAHVELNGCKAI
Template Known Secondary structure 


SSS



SS.TT

SS
SS

TT
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   6970.........80.........90.........100 .........110.........120.........130.........140.......
 
   261........270.........280.........290.........300.. .......310... ......320...... ...330....
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Query Sequence  WLKPTRNALGILGGIPRREFTRDSIEEKVAATTQAQWPVHAV. ITNSTYDGLLY. . . NTDWIKQTLDVPS. . IHFDSAWV
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Template Sequence  NIVTEKAFDSETYDDWKGDFDIKKLKENIAQHGADNIVAIVSTVTCNSAGGQPVSMSNLKEVYEIAKQHGIFVVMDSARF
Template Known Secondary structure 
B
GGGG
TTS

TTTT
B

GGGSSBTTTTSB


T


TT
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   148.150.........160.........170.........180.........190.........200.........210.........220.......
 
   335 ....340.........350..... ....360.........370.........380.........390.........400........
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Query Sequence  P. YTHFHPIYQGKSGMSGERVA. . . . . GKVIFETQSTHKMLAALSQASLIHIKGEYDEEAFNEAFMMHTTTSPSYPIVAS
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Template Sequence  CENAYFIKARDPKYKNATIKEVIFDMYKYADALTMSAKDPLLN. . IGGLVAIRDNEEIFTLARQRCVPMEGFVTYGGLAG
Template Known Secondary structure 
GGGTT

GGG
S





S..S
SS
T
STTTTT

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   228.230.........240.........250.........260.........270 .........280.........290.........300.....
 
   409410.........420 .........430.........440.........450.........460.........470.........480......
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Query Sequence  VETAAAMLRGNP. . GKRLINRSVERALHFRKEVQRLREESDGWFFDIWQPPQVDEAECWPVAPGEQWHGFNDADADHMFL
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Template Sequence  RDMAAMVQGLEEGTEEEYLHYRIGQVKYLGDRLREA. GIPIQY. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  TT
T.T

B
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   307..310.........320.........330.........340.. ......
 
   487..490.........500.........510........ .520..... ....530.........540. ......
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Query Sequence  DPVKVTILTPGMDEQGNMSEEGIPAALVAKFL. DERGIVV. . . . . . . . . . . . . . . . . EKTGPYNLLFLFSIGI. DKTKAM
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Template Sequence  PTGGHAVFVDCKKLVPQIPGDQFPAQAVINALYLESGVRAVEIGSFLLGRDPATGEQKHADMEFMRLTIARRVYTNDHMD
Template Known Secondary structure  S

SSSTTT
TTS
GGG


S
B
TTT
SB


S



TTSS
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   349350.........360.........370.........380.........390.........400.........410.........420........
 
   548.550.........560.......
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Query Sequence  GLLRGLTEFKRSYDLNLRIK
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Template Sequence  YIADALIGLKEKFATLKGLE
Template Known Secondary structure  TTTT


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   429430.........440........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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