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Job DescriptionP52095
Confidence99.84%DateThu Jan 5 12:05:15 GMT 2012
Rank46Aligned Residues308
% Identity14%Templatec3uwcA_
PDB info PDB header:transferaseChain: A: PDB Molecule:nucleotide-sugar aminotransferase; PDBTitle: structure of an aminotransferase (degt-dnrj-eryc1-strs family) from2 coxiella burnetii in complex with pmp
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   189190.........200.........210.........220.........230.........240.........250.........260........
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Query Sequence  SLLDHTGPHLEAEEYIARTFGAEQSYIVTNGTSTSNKIVGMYAAPSGSTLLIDRNCHKSLAHLLMMNDVVPVWLKPTRNA
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Template Conservation       
     

  

   
    
   


 

  

       

 

                             
Template Sequence  ADFTLGAELEKFEKRFAALHNAPHAIGVGTGTDALAXSFKXLNIGAGDEVITCANTFIASVGAIVQAGATPVLVDSENGY
Template Known Secondary structure  T

SS
TT
SS
TT

TT
SSS
TT

B
TTS
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   2930.........40.........50.........60.........70.........80.........90.........100........
 
   269270.........280.........290.........300.........310.........320...... ...330.........340......
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Query Sequence  LGILGGIPRREFTRDSIEEKVAATTQAQWPVHAVITNSTYDGLLYNTDWIKQTLDVPS. . IHFDSAWVPYTHFHPIYQGK
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Template Conservation     .................                     
       
  
       

 
 
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Template Sequence  VID. . . . . . . . . . . . . . . . . PEKIEAAITDKTKAIXPVHYTGNIADXPALAKIAKKHNLHIVEDACQT. . ILGRINDKFV
Template Known Secondary structure  SB
.................GGGTGGG

TT

B
GGG



TT

TT
..TT
TTT
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   109110. ........120.........130.........140.........150......... 160.........
 
   347..350.........360.........370.........380.........390.........400...... ...410.........420
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Query Sequence  SGMSGERVAGKVIFETQSTHKMLAALSQASLIHIKGEYDEEAFNEAFMMHTTTSPSYPIV. . . . . . ASVETAAAMLRGNP
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Template Sequence  . . . . . . GSWGQFACFSLHPLKNLNVWSDAGVIITHSDEYAEKLRLYRNHGLINRDVCVEYGINCRXDTIQAVIANRLXNQ
Template Known Secondary structure  ......TSSSS
SSSSSS

SS

S
TBTTTTSS


B
B

GGG
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   170.........180.........190.........200.........210.........220.........230.........240...
 
   421........430.........440.........450.........460.........470.........480.........490.........500
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Query Sequence  GKRLINRSVERALHFRKEVQRLREESDGWFFDIWQPPQVDEAECWPVAPGEQWHGFNDADADHMFLDPVKVTILTPGMDE
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Template Conservation                
   
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Template Sequence  LETITEKRRGIAHLYDQSFVDLSEFIDVPVRREGVYH. . . . . . . . . . . . . . . . . . . . . . . . . . . . . VFHIYVL. . . . . . .
Template Known Secondary structure  TGGGTTT




TT
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   244.....250.........260.........270.........280 .......
 
   501........510.........520.........530. ........540.........550...
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Query Sequence  QGNMSEEGIPAALVAKFLDERGIVVEKTGPY. . . . . . . . . . . . . . . . . . . . . . . . . . . NLLFLFSIGIDKTKAMGLLRGL
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Template Sequence  . . . . . . RVKYRDQLFQYLKDNGIEVKIHYPIAXHLQPAAKSLGYQQGDFPXAEKHGEAVITLPAHPYLTEEEINYIIKKV
Template Known Secondary structure  ......TTTTB

B
S
SS
GGGSGGGGGG


TTS



TTS
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   288.290.........300.........310.........320.........330.........340.........350.........360.
 
   554.....560...
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Query Sequence  TEFKRSYDLN
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Template Conservation       
    
Template Sequence  REFYLEKHYN
Template Known Secondary structure  TTTT
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   362.......370.
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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