Job Description P52095 Confidence 99.67% Date Thu Jan 5 12:05:15 GMT 2012 Rank 110 Aligned Residues 292 % Identity 12% Template c3qi6B_ PDB info PDB header:lyase Chain: B: PDB Molecule:cystathionine gamma-synthase metb (cgs); PDBTitle: crystal structure of cystathionine gamma-synthase metb (cgs) from2 mycobacterium ulcerans agy99 Resolution 1.91 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		197	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.					.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.
Predicted Secondary structure																																																													.	.	.	.
Query SS confidence																																																													.	.	.	.
Query Sequence		H	L	E	A	E	E	Y	I	A	R	T	F	G	A	E	Q	S	Y	I	V	T	N	G	T	S	T	S	N	K	I	V	G	M	Y	A	A	P	S	G	S	T	L	L	I	D	R	N	C	H	K	S	L	A	H	L	L	M	M	N	.	.	.	.	D	V	V	P	V	W	L	K	P	T	R	N	A	L	G	I	L
Query Conservation																																																													.	.	.	.
Alig confidence																					.																																								.	.	.	.											.	.	.	.	.	.	.
Template Conservation																					.																																																						.	.	.	.	.	.	.
Template Sequence		R	T	A	L	E	A	A	L	A	A	V	E	D	A	A	F	G	R	A	.	F	S	S	G	M	A	A	A	D	C	A	L	R	A	M	L	R	P	G	D	H	V	V	I	P	D	D	A	Y	G	G	T	F	R	L	I	D	K	V	F	T	G	W	N	V	E	Y	T	P	V	A	L	A	.	.	.	.	.	.	.
Template Known Secondary structure													T	T		S					.		S	S															T	T							T	T												T	G	G	G	G	T								T	T	.	.	.	.	.	.	.
Template Predicted Secondary structure																					.																																																						.	.	.	.	.	.	.
Template SS confidence
		64	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.		.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.
		273	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.		.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.			.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																				.																					.	.
Query SS confidence																																				.																					.	.
Query Sequence		G	G	I	P	R	R	E	F	T	R	D	S	I	E	E	K	V	A	A	T	T	Q	A	Q	W	P	V	H	A	V	I	T	N	S	.	T	Y	D	G	L	L	Y	N	T	D	W	I	K	Q	T	L	D	V	P	S	.	.	I	H	F	D	S	A	W	V	P	Y	T	H	F	H	P	I	Y	Q	G	K	S	G	M
Query Conservation																																				.																					.	.
Alig confidence		.	.	.	.	.	.	.	.																.	.	.	.	.							.																					.	.																.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.																.	.	.	.	.																																													.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	D	L	D	A	V	R	A	A	I	R	P	T	T	R	L	.	.	.	.	.	I	W	V	E	T	P	T	N	P	L	L	S	I	A	D	I	A	G	I	A	Q	L	G	A	D	S	S	A	K	V	L	V	D	N	T	F	A	S	P	A	L	Q	Q	P	.	.	.	.	.	.	.	.
Template Known Secondary structure		.	.	.	.	.	.	.	.											T	T				.	.	.	.	.					S	S		T	T	T																T	T								T	T	T		T	T	T			G	.	.	.	.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.																.	.	.	.	.																																													.	.	.	.	.	.	.	.
Template SS confidence
										136	.	.	.	140	.	.	.	.	.	.	.	.	.	150						.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.
		350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	G	E	R	V	A	G	K	V	I	F	E	T	Q	S	T	H	K	M	L	A	A	L	S	Q	A	S	L	I	H	I	K	G	E	Y	D	E	E	A	F	N	E	A	F	M	M	H	T	T	T	S	P	S	Y	P	I	V	A	S	V	E	T	A	A	A	M	L	R	G	N	P	G	K	R	L	I	N	R	S	V
Query Conservation
Alig confidence		.	.	.	.																																																																			.	.	.	.	.
Template Conservation		.	.	.	.																																																																			.	.	.	.	.
Template Sequence		.	.	.	.	L	S	L	G	A	D	V	V	L	H	S	T	T	Y	I	G	G	H	S	D	V	V	G	G	A	L	V	T	N	D	E	E	L	D	Q	S	F	A	F	L	Q	N	G	A	G	A	V	P	G	P	F	D	A	Y	L	T	M	R	G	L	K	T	L	V	L	R	.	.	.	.	.	M	Q	R	H	S
Template Known Secondary structure		.	.	.	.	G	G	G	T		S										S		S	S										S																																T	T					.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.																																																																			.	.	.	.	.
Template SS confidence
						195	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260						.	.	.	.	.
		430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	R	A	L	H	F	R	K	E	V	Q	R	L	R	E	E	S	D	G	W	F	F	D	I	W	Q	P	P	Q	V	D	E	A	E	C	W	P	V	A	P	G	E	Q	W	H	G	F	N	D	A	D	A	D	H	M	F	L	D	P	V	K	V	T	I	L	T	P	G	M	D	E	Q	G	N	M	S	E	E	G	I
Query Conservation
Alig confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																									.	.	.	.	.
Template Conservation																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																									.	.	.	.	.
Template Sequence		E	N	A	A	A	V	A	E	F	L	A	E	H	P	A	I	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	V	L	Y	P	G	L	P	S	H	P	G	H	A	V	A	A	R	Q	M	R	G	F	G	G	M	V	S	V	R	M	R	A	G	R	T	A	A	E	Q	.	.	.	.	.
Template Known Secondary structure													T		T	T			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					T	T	S	T	T	S	T	T									S	S			S							T	T								.	.	.	.	.
Template Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																									.	.	.	.	.
Template SS confidence
		267	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.																			.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.
		510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.																				.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.
Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	A	A	L	V	A	K	F	L	D	E	R	G	I	V	V	E	K	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	P	Y	N	L	L	F	L	F	S	I	G	I	D	K	T	K	A	M	G	L	L	R	G	L
Query Conservation																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.
Template Sequence		.	.	.	.	L	C	A	K	T	N	I	F	I	L	A	E	S	L	G	S	V	E	S	L	I	E	H	P	S	A	M	T	G	S	Q	L	E	V	P	D	D	L	V	R	L	S	V	G	I	E	D	V	A	D	L	L	D	D	L	K	Q	A	L
Template Known Secondary structure		.	.	.	.						S	S	S				S					S	S						T	T	T					S					T	T								S	S
Template Predicted Secondary structure		.	.	.	.
Template SS confidence
						324	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions