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Job DescriptionP52095
Confidence99.50%DateThu Jan 5 12:05:15 GMT 2012
Rank181Aligned Residues307
% Identity12%Templatec3nx3A_
PDB info PDB header:transferaseChain: A: PDB Molecule:acetylornithine aminotransferase; PDBTitle: crystal structure of acetylornithine aminotransferase (argd) from2 campylobacter jejuni
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   193......200.........210.........220.........230. ........240.........250.........260.....
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Query Sequence  HTGPHLEAEEYIARTFGAEQSYIVTNGTSTSNKIVGMYA. . . . . . . APSGSTLLIDRNCHKSLAHLLMMNDVVPVWLKPT
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Template Sequence  YNENIAAAAKNLAKASALERVFFTNSGTESIEGAXKTARKYAFNKGVKGGQFIAFKHSFHGRTLGALSLTANEKYQKPFK
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   76...80.........90.........100.........110.........120.........130.........140.........150.....
 
   266...270.........280.........290.........300.........310.... .....320...... ...330.........340
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Query Sequence  RNALGILGGIPRREFTRDSIEEKVAATTQAQWPVHAVITNSTYDGLLYN. . . TDWIKQTLDVPS. . IHFDSAWVPYTHFH
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Template Sequence  PLISGVK. . . . . . FAKYNDISSVEKLVNEKTCAIILESVQGEGGINPANKDFYKALRKLCDEKDILLIADEIQCGXGRSG
Template Known Secondary structure  S

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   156...160.. .......170.........180.........190.........200.........210.........220.........
 
   341........350.........360.........370.........380.........390.........400.........410.........420
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Query Sequence  PIYQGKSGMSGERVAGKVIFETQSTHKMLAALSQASLIHIKGEYDEEAFNEAFMMHTTTSPSYPIVASVETAAAMLRGNP
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Template Sequence  KF. . . . . . FAYEHAQILPDIX. . TSAKALGCGLSVGAFVINQK. VASNSLEAGDHGSTYGGNPLVCAGVNAVFEIFK. . .
Template Known Secondary structure  SS......SGGGGGT


S..
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   230. ........240.... .....250.........260.... .....270.........280.........290.......
 
   421........430.........440.........450.........460.........470.........480.........490.........500
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Query Sequence  GKRLINRSVERALHFRKEVQRLREESDGWFFDIWQPPQVDEAECWPVAPGEQWHGFNDADADHMFLDPVKVTILTPGMDE
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Template Sequence  EEKILENVNKLTPYLEQSLDELI. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . NEFDFCKKRKGLGF
Template Known Secondary structure  TT...........................................
TTTT
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   298.300.........310.........320 .........330....
 
   501........510.........520.........530.........540.........550.........560
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Query Sequence  . QGNMSEEGIPAALVAKFLDERGIVVEKTGPYNLLFLFSIGIDKTKAMGLLRGLTEFKRSY
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Template Sequence  XQGLSLDKSVKVAKVIQKCQENALLLISCGENDLRFLPPLILQKEHIDEXSEKLRKALKSF
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TTS
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   335....340.........350.........360.........370.........380.........390.....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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