Job Description P52095 Confidence 98.54% Date Thu Jan 5 12:05:15 GMT 2012 Rank 236 Aligned Residues 315 % Identity 15% Template c3n5mD_ PDB info PDB header:transferase Chain: D: PDB Molecule:adenosylmethionine-8-amino-7-oxononanoate aminotransferase; PDBTitle: crystals structure of a bacillus anthracis aminotransferase Resolution 2.05 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		193	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.										.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.
Predicted Secondary structure																																										.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.
Query SS confidence																																										.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.
Query Sequence		H	T	G	P	H	L	E	A	E	E	Y	I	A	R	T	F	G	A	E	Q	S	Y	I	V	T	N	G	T	S	T	S	N	K	I	V	G	M	Y	A	A	.	.	.	.	.	.	.	.	.	P	S	G	S	T	L	L	I	D	R	N	C	H	K	S	L	A	H	L	L	M	M	N	D	.	.	.	.	.	.	.
Query Conservation																																										.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.
Alig confidence																																										.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	H	E	P	A	I	K	L	A	E	K	L	N	E	W	L	G	G	E	Y	V	I	F	F	S	N	S	G	S	E	A	N	E	T	A	F	K	I	A	R	Q	Y	Y	A	Q	K	G	E	P	H	R	Y	K	F	X	S	R	Y	R	G	Y	H	G	N	T	X	A	T	X	A	A	T	G	Q	A	Q	R	R	Y	Q
Template Known Secondary structure																		T	S								S	S																		T	T	T		T	T								T	T					S	S						S				G	G	G	T	T	T
Template Predicted Secondary structure
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
						257	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.					.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.			310	.	.	.	.					.	.	.	.	.	320	.	.
Predicted Secondary structure		.	.	.	.																																	.	.	.	.																						.	.						.	.	.	.
Query SS confidence		.	.	.	.																																	.	.	.	.																						.	.						.	.	.	.
Query Sequence		.	.	.	.	V	V	P	V	W	L	K	P	T	R	N	A	L	G	I	L	G	G	I	P	R	R	E	F	T	R	D	S	I	E	E	K	.	.	.	.	V	A	A	T	T	Q	A	Q	W	P	V	H	A	V	I	T	N	S	T	Y	D	.	.	G	L	L	Y	N	.	.	.	.	T	D	W	I	K	Q	T	L
Query Conservation		.	.	.	.																																	.	.	.	.																						.	.						.	.	.	.
Alig confidence		.	.	.	.																																	.	.	.	.										.	.	.										.	.						.	.	.	.
Template Conservation																																																			.	.	.
Template Sequence		Y	E	P	F	A	S	G	F	L	H	V	T	P	P	D	C	Y	R	X	P	G	I	E	R	E	N	I	Y	D	V	E	C	V	K	E	V	D	R	V	X	T	W	E	L	S	E	T	I	A	.	.	.	A	F	I	X	E	P	I	I	T	G	G	G	I	L	X	A	P	Q	D	Y	X	K	A	V	H	E	T	C
Template Known Secondary structure		T					S										T	T	T	S	T	T	T	T	T	S		G	G	G																G	G	G			.	.	.						S	S	B	T	T	T	T		B				T	T
Template Predicted Secondary structure																																																			.	.	.
Template SS confidence
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.				.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
		323	.	.	.			.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.				.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.
Predicted Secondary structure						.	.																																																					.	.	.
Query SS confidence						.	.																																																					.	.	.
Query Sequence		D	V	P	S	.	.	I	H	F	D	S	A	W	V	P	Y	T	H	F	H	P	I	Y	Q	G	K	S	G	M	S	G	E	R	V	A	G	K	V	I	F	E	T	Q	S	T	H	K	M	L	A	A	L	S	Q	A	S	L	I	.	.	.	H	I	K	G	E	Y	D	E	E	A	F	N	E	A	F	M	M	H	T
Query Conservation						.	.																																																					.	.	.
Alig confidence						.	.																					.	.	.	.	.	.																											.	.	.
Template Conservation																												.	.	.	.	.	.
Template Sequence		Q	K	H	G	A	L	L	I	S	D	E	V	I	C	G	F	G	R	T	G	K	A	F	G	F	X	.	.	.	.	.	.	N	Y	D	V	K	P	D	I	I	T	X	A	K	G	I	T	S	A	Y	L	P	L	S	A	T	A	V	K	R	E	I	Y	E	A	F	K	G	K	G	E	Y	E	F	F	R	H	I	N
Template Known Secondary structure					T								T	T	T	T	T	T	T	T	S	S	S	S	G	G	G	.	.	.	.	.	.	G	T	T				S						G	G	G	G	T	T	S	S													G	G	G		S	S	S	T	T		S
Template Predicted Secondary structure																												.	.	.	.	.	.
Template SS confidence
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.							.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.
		398	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	T	S	P	S	Y	P	I	V	A	S	V	E	T	A	A	A	M	L	R	G	N	P	G	K	R	L	I	N	R	S	V	E	R	A	L	H	F	R	K	E	V	Q	R	L	R	E	E	S	D	G	W	F	F	D	I	W	Q	P	P	Q	V	D	E	A	E	C	W	P	V	A	P	G	E	Q	W	H	G	F	N
Query Conservation
Alig confidence																						.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																						.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	F	G	G	N	P	A	A	C	A	L	A	L	K	N	L	E	I	I	E	.	.	.	N	E	N	L	I	E	R	S	A	Q	X	G	S	L	L	L	E	Q	L	K	E	E	I	G	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		S	S	S	S																	.	.	.		T	T																					T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																						.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		317	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.				.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.
		478	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510									.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.							.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.
Predicted Secondary structure																																			.	.	.	.	.	.	.	.																		.	.	.	.	.	.
Query SS confidence																																			.	.	.	.	.	.	.	.																		.	.	.	.	.	.
Query Sequence		D	A	D	A	D	H	M	F	L	D	P	V	K	V	T	I	L	T	P	G	M	D	E	Q	G	N	M	S	E	E	G	I	P	.	.	.	.	.	.	.	.	A	A	L	V	A	K	F	L	D	E	R	G	I	V	V	E	K	.	.	.	.	.	.	T	G	P	Y	N	L	L	F	L	F	S	I	G	I	D	K
Query Conservation																																			.	.	.	.	.	.	.	.																		.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.																		.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	H	P	L	V	G	D	I	R	G	K	G	L	L	V	G	I	E	L	V	N	D	K	E	T	K	E	P	I	D	N	D	K	I	A	S	V	V	N	A	C	K	E	K	G	L	I	I	G	R	N	G	X	T	T	A	G	Y	N	N	I	L	T	L	A	P	P	L	V	I	S	S
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	S	T	T							S	S	S										T	T	T	T																		T	T							T	T	S	S	T	T											T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.
Template SS confidence
											362	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.
		544	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Predicted Secondary structure
Query SS confidence
Query Sequence		T	K	A	M	G	L	L	R	G	L	T	E	F	K	R	S	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	E	I	A	F	V	I	G	T	L	K	T	A	X	E	R	I
Template Known Secondary structure																T	T
Template Predicted Secondary structure
Template SS confidence
		433	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions