Job Description P52095 Confidence 24.90% Date Thu Jan 5 12:05:15 GMT 2012 Rank 432 Aligned Residues 94 % Identity 12% Template c3hjhA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:transcription-repair-coupling factor; PDBTitle: a rigid n-terminal clamp restrains the motor domains of the bacterial2 transcription-repair coupling factor Resolution 1.95 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		209	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.			.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.
Predicted Secondary structure																																									.	.
Query SS confidence																																									.	.
Query Sequence		G	A	E	Q	S	Y	I	V	T	N	G	T	S	T	S	N	K	I	V	G	M	Y	A	A	P	S	G	S	T	L	L	I	D	R	N	C	H	K	S	.	.	L	A	H	L	L	M	M	N	D	V	V	P	V	W	L	K	P	T	R	N	A	L	G	I	L	G	G	I	P	R	R	E	F	T	R	D	S	I	E
Query Conservation																																									.	.
Alig confidence																																									.	.
Template Conservation
Template Sequence		G	E	Q	R	L	L	G	E	L	T	G	A	A	C	A	T	L	V	A	E	I	A	E	R	H	A	G	P	V	V	L	I	A	P	D	M	Q	N	A	L	R	L	H	D	E	I	S	Q	F	T	D	Q	M	V	M	N	L	A	D	W	E	T	L	P	Y	D	S	F	S	P	H	Q	D	I	I	S	S	R	L	S
Template Known Secondary structure		T										T	T													S	S	S							S	S														T		S	S										S		T	T		S	S
Template Predicted Secondary structure
Template SS confidence
		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
		287	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	K	V	A	A	T	T	Q	A	Q	W	P	V	H	A	V	I	T	N
Query Conservation
Alig confidence													.	.	.
Template Conservation													.	.	.
Template Sequence		T	L	Y	Q	L	P	T	M	Q	R	G	.	.	.	V	L	I	V	P
Template Known Secondary structure						G	G	G			S	S	.	.	.
Template Predicted Secondary structure													.	.	.
Template SS confidence
		94	.	.	.	.	.	100	.	.	.	.				.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions