 |
Job Description | P52095 | Confidence | 26.37% | Date | Thu Jan 5 12:05:15 GMT 2012 |
Rank | 421 | Aligned Residues | 119 |
% Identity | 13% | Template | c3hjbA_ |
PDB info |
PDB header:isomerase | Chain: A: PDB Molecule:glucose-6-phosphate isomerase; |
PDBTitle: 1.5 angstrom crystal structure of glucose-6-phosphate isomerase from2 vibrio cholerae.
|
Resolution | 1.50 Å |
|
 |
  |   |
49 | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
N | P | R | I | C | G | V | I | F | D | W | D | E | Y | S | L | D | L | C | S | D | I | N | Q | L | N | E | Y | L | P | L | Y | A | F | I | N | T | H | S | T | M | D | V | S | V | Q | D | M | R | M | A | L | W | F | F | E | Y | A | L | G | Q | A | E | D | I | A | I | R | M | R | Q | Y | T | D | E | Y | L | D | N | I |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
Template Conservation |   |
  |   |   |   |   |
|   |
|
|   | . |
|
|
|
|   |   |   |   |   |   |
|   |   |
|
|   |   |   |
|
|   |
|
|
|
|
|
|
|
|
|   |
|
|
|   |
|   |   |   |   |
|   |   |
|   |   |   |   |
|   |   |   |   |   |   |
|
|   |
|
|
|
|   |   | . | . | . | . | . |
Template Sequence |   |
K | N | H | L | T | V | H | F | V | S | . |
N | V | D | G | T | H | M | A | E | T | L | K | N | V | D | P | E | T | T | L | F | L | V | A | S | K | T | F | T | T | Q | E | T | M | T | N | A | H | T | A | R | D | W | F | L | K | A | A | G | D | E | A | H | V | A | K | H | F | A | A | L | S | T | N | . |
. |
. |
. |
. |
Template Known Secondary structure |   |
|
| S |
|  |  |  |  |  |
| . |
| S | S |  |  |  |  |  |  |  |  | T | T |
|
| G | G | G |  |  |  |  |  |  |
| S | S | S |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| S | G | G | G | G | G | G | T |  |  |  |  | S | S |
| . | . | . | . | . |
Template Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  | . |
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |
|
|
|  |  |  |  |  |  |
|
| . | . | . | . | . |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
174 | . | . | . | . | . | 180 | . | . | . | |
. | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | |
|
|
|
|
  |
  |   |
129 | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
T | P | P | F | T | K | A | L | F | T | Y | V | K | E | R | K | Y | T | F | C | T | P | G | H | M | G | G | T | A | Y | Q | K | S | P | V | G | C | L | F | Y | D | F | F | G | G | N | T | L | K |
Query Conservation |   |
  |
|
|
|   |   |
|
|   |   |
|   |   |   |   |   |   |   |
|
|   |
|
|
|
|   |
|   |   |   |   |   |
|   |   |   |   |   |
|   |   |
|   |
|
|
|   |   |   |
Alig confidence |   |
. | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
. | . | . | . |   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|   |   |
|
|   |
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
|   |   |   |
|   |
|   |   |   |
Template Sequence |   |
. |
. |
. |
. |
G | K | A | V | A | E | F | G | I | D | T | D | N | M | F | E | F | W | D | W | V | G | G | R | Y | S | L | W | S | A | I | G | L | S | I | I | L | S | I | G | Y | D | N | F | V |
Template Known Secondary structure |   |
. | . | . | . |  |  |  |  |  |  |  | T |
|
| G | G | G |  |  |
|
|
| T | T | S |
| G | G | G |
| T | T | T | G | G | G |  |  |  |  |  |  |  |
|  |  |  |  |  |
Template Predicted Secondary structure |   |
. | . | . | . |
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
|
|
|
|
|
|
|  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |
|  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
|
|
|
|
248 | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|