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Job DescriptionP52095
Confidence99.88%DateThu Jan 5 12:05:15 GMT 2012
Rank26Aligned Residues355
% Identity16%Templatec3f9tB_
PDB info PDB header:lyaseChain: B: PDB Molecule:l-tyrosine decarboxylase mfna; PDBTitle: crystal structure of l-tyrosine decarboxylase mfna (ec 4.1.1.25)2 (np_247014.1) from methanococcus jannaschii at 2.11 a resolution
Resolution2.11 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   132.......140.........150.........160.........170.........180.........190.........200.........210.
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Query Sequence  FTKALFTYVKERKYTFCTPGHMGGTAYQKSPVGCLFYDFFGGNTLKADVSISVTELGSLLDHTGPHLEAEEYIARTFGAE
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Template Sequence  ILEELKKYRSLDLKYEDGNIFGSXCSNVLPITRKIVDIFLETNLGDPGLFKGTKL. . . . . . . . . LEEKAVALLGSLLNNK
Template Known Secondary structure  TTS

GGGS
B
S
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TTT

TTSGGG
.........TT
T
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   14.....20.........30.........40.........50.........60........ .70.........80....
 
   212.. .....220.........230... ......240.........250.........260.........270.......
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Query Sequence  QSY. IVTNGTSTSNKIVGMYAAP. . . . . . . . . . . . . SGSTLLIDRNCHKSLAHLLMMNDVVPVWLKPTRNALGILGGIPR
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Template Sequence  DAYGHIVSGGTEANLXALRCIKNIWREKRRKGLSKNEHPKIIVPITAHFSFEKGREXXDLEYIYAPIKEDY. . . . . . . . .
Template Known Secondary structure  T
S
TT



SS
TT

TT

B
TTS.........
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   85....90.........100.........110.........120.........130.........140.........150.....
 
   278.280.........290.........300.........310.........320...... ...330.... .....340.........350.. .
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Query Sequence  REFTRDSIEEKVAATTQAQWPVHAVITNSTYDGLLYNTDWIKQTLDVPS. . IHFDSAWV. PYTHFHPIYQGKSGMSGE. R
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Template Sequence  . TIDEKFVKDAVEDYDVDGI. . . IGIAGTTELGTIDNIEELSKIAKENNIYIHVDAAFGGLVIPFLDDKYKKKGVNYKFD
Template Known Secondary structure  .SB
S


...BS
TTT

B

T

TTGGGTGGG

GGG

TT




S
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   156...160.........170.... .....180.........190.........200.........210.........220.........230.
 
   354.....360.........370.........380.........390....... ..400.........410.........420......
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Query Sequence  VAGKVIFETQSTHKMLAALSQASLIHIKGEYDEEAFNEAFMMHT. . . . . . . TTSPSYPIVASVETAAAMLRGNPGKRLIN
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Template Conservation               
        
                                                         
Template Sequence  FSLGVDSITIDPHKXGHCPIPSGGILFKDIGYKRYLDVDAPYLTETRQATILGTRVGFGGACTYAVLRYLGREGQRKIVN
Template Known Secondary structure  GGGT
S

TTTTT


SS
SSGGGGGGT

TTSSSS
SS
SS

S
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   232.......240.........250.........260.........270.........280.........290.........300.........310.
 
   427..430.........440.........450.........460.........470.........480.........490.........500......
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Query Sequence  RSVERALHFRKEVQRLREESDGWFFDIWQPPQVDEAECWPVAPGEQWHGFNDADADHMFLDPVKVTILTPGMDEQGNMSE
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Template Sequence  ECXENTLYLYKKLKENNFKPVI. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . EPILNIVAIE. . . . . . . . . .
Template Known Secondary structure  TT

BSS......................................

SSS..........
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   312.......320.........330... ......340...
 
   507..510.........520.........530.... .....540.........550.......
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Query Sequence  EGIPAALVAKFLDERGIVVEKTGPYNLL. FLFSIGIDKTKAMGLLRGLTEFK
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Template Sequence  . DEDYKEVCKKLRDRGIYVSVCNCVKALRIVVXPHIKREHIDNFIEILNSIK
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TTTT
B

SSSS

TT


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   344.....350.........360.........370.........380.........390....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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