Job Description P52095 Confidence 99.62% Date Thu Jan 5 12:05:15 GMT 2012 Rank 134 Aligned Residues 296 % Identity 10% Template c3e77A_ PDB info PDB header:transferase Chain: A: PDB Molecule:phosphoserine aminotransferase; PDBTitle: human phosphoserine aminotransferase in complex with plp Resolution 2.50 Å

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		196	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.				.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.			.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270
Predicted Secondary structure																					.	.	.																				.	.
Query SS confidence																					.	.	.																				.	.
Query Sequence		P	H	L	E	A	E	E	Y	I	A	R	T	F	G	A	E	Q	S	Y	.	.	.	I	V	T	N	G	T	S	T	S	N	K	I	V	G	M	Y	A	A	P	.	.	S	G	S	T	L	L	I	D	R	N	C	H	K	S	L	A	H	L	L	M	M	N	D	V	V	P	V	W	L	K	P	T	R	N	A	L	G
Query Conservation																					.	.	.																				.	.
Alig confidence																					.	.	.																				.	.
Template Conservation
Template Sequence		I	I	N	N	T	E	N	L	V	R	E	L	L	A	V	P	D	N	Y	K	V	I	F	L	Q	G	G	G	C	G	Q	F	S	A	V	P	L	N	L	I	G	L	K	A	G	R	C	A	D	Y	V	V	T	G	A	W	S	A	K	A	A	E	E	A	K	K	F	G	T	I	N	I	V	H	P	K	L	G	S	Y
Template Known Secondary structure															T			T	T							S	S														G	G	G	S	T	T									S											T	T	T	S						S				S	S	S
Template Predicted Secondary structure
Template SS confidence
		52	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.
		271	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.		.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.			.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.
Predicted Secondary structure																																						.																					.	.
Query SS confidence																																						.																					.	.
Query Sequence		I	L	G	G	I	P	R	R	E	F	T	R	D	S	I	E	E	K	V	A	A	T	T	Q	A	Q	W	P	V	H	A	V	I	T	N	S	.	T	Y	D	G	L	L	Y	N	T	D	W	I	K	Q	T	L	D	V	P	S	.	.	I	H	F	D	S	A	W	V	P	Y	T	H	F	H	P	I	Y	Q	G	K	S
Query Conservation																																						.																					.	.
Alig confidence							.	.	.	.	.	.	.	.	.	.	.	.	.																			.									.	.	.	.	.								.	.										.	.	.	.	.	.	.	.	.	.	.
Template Conservation							.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	K	I	P	D	.	.	.	.	.	.	.	.	.	.	.	.	.	P	S	T	W	N	L	N	P	D	A	S	Y	V	Y	Y	C	A	N	E	T	V	H	G	V	E	F	D	.	.	.	.	.	F	I	P	D	V	K	G	A	V	L	V	C	D	M	S	S	N	F	.	.	.	.	.	.	.	.	.	.	.	L
Template Known Secondary structure			S				.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	G					T	T		S						S			T	T	T	T				S	.	.	.	.	.	S					T	T								T	T	T	T	.	.	.	.	.	.	.	.	.	.	.	T
Template Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		132	.	.	.	.														.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.						.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.												.
		348	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.										.	390	.	.	.	.	.	.	.	.	.	400		.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.
Predicted Secondary structure																																											.	.	.	.	.	.	.	.	.													.
Query SS confidence																																											.	.	.	.	.	.	.	.	.													.
Query Sequence		G	M	S	G	E	R	V	A	G	K	V	I	F	E	T	Q	S	T	H	K	M	L	A	A	L	S	Q	A	S	L	I	H	I	K	G	E	Y	D	E	E	A	.	.	.	.	.	.	.	.	.	F	N	E	A	F	M	M	H	T	T	T	S	.	P	S	Y	P	I	V	A	S	V	E	T	A	A	A	M	L	R
Query Conservation																																											.	.	.	.	.	.	.	.	.													.
Alig confidence																.	.							.																			.	.	.	.	.	.	.	.	.													.
Template Conservation																.	.							.
Template Sequence		S	K	P	V	D	V	S	K	F	G	V	I	F	A	.	.	G	A	Q	K	N	V	.	G	S	A	G	V	T	V	V	I	V	R	D	D	L	L	G	F	A	L	R	E	C	P	S	V	L	E	Y	K	V	Q	A	G	N	S	S	L	Y	N	T	P	P	C	F	S	I	Y	V	M	G	L	V	L	E	W	I	K
Template Known Secondary structure		S	S				G	G	G		S					.	.		G	G	G	T	T	.	S		T	T								T	T	S		S				T	T	S		G	G	G							T	T	T	T		S	S
Template Predicted Secondary structure																.	.							.
Template SS confidence
		183	.	.	.	.	.	.	190	.	.	.	.	.	.			.	.	.	200	.	.		.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.
		418	.		420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.
Predicted Secondary structure				.
Query SS confidence				.
Query Sequence		G	N	.	P	G	K	R	L	I	N	R	S	V	E	R	A	L	H	F	R	K	E	V	Q	R	L	R	E	E	S	D	G	W	F	F	D	I	W	Q	P	P	Q	V	D	E	A	E	C	W	P	V	A	P	G	E	Q	W	H	G	F	N	D	A	D	A	D	H	M	F	L	D	P	V	K	V	T	I	L	T	P
Query Conservation				.
Alig confidence				.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	N	G	G	A	A	A	M	E	K	L	S	S	I	K	S	Q	T	I	Y	E	I	I	D	N	S	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	F	Y	V	C	P	V	E	P	Q	N	R	S	K	M	N	I	P	F	R	I	G
Template Known Secondary structure			T	T																						T	S	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	S					S		G	G	G	B		S	S							S
Template Predicted Secondary structure																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.																																.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.
		497	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.			.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Predicted Secondary structure																																					.	.
Query SS confidence																																					.	.
Query Sequence		G	M	D	E	Q	G	N	M	S	E	E	G	I	P	A	A	L	V	A	K	F	L	D	E	R	G	I	V	V	E	K	T	G	P	Y	.	.	N	L	L	F	L	F	S	I	G	I	D	K	T	K	A	M	G	L	L	R	G	L	T	E	F	K	R	S	Y
Query Conservation																																					.	.
Alig confidence													.	.	.	.	.	.																			.	.
Template Conservation													.	.	.	.	.	.
Template Sequence		N	A	K	G	D	D	A	L	E	K	R	.	.	.	.	.	.	F	L	D	K	A	L	E	L	N	M	L	S	L	K	G	H	R	S	V	G	G	I	R	A	S	L	Y	N	A	V	T	I	E	D	V	Q	K	L	A	A	F	M	K	K	F	L	E	M	H
Template Known Secondary structure		S	T	T									.	.	.	.	.	.								T	T			S		B			T	T	T		S							T	T	S
Template Predicted Secondary structure													.	.	.	.	.	.
Template SS confidence
		309	310	.	.	.	.	.	.	.	.	.							320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions