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Job DescriptionP52095
Confidence99.64%DateThu Jan 5 12:05:15 GMT 2012
Rank127Aligned Residues313
% Identity13%Templatec3dc1A_
PDB info PDB header:transferaseChain: A: PDB Molecule:kynurenine/alpha-aminoadipate aminotransferase PDBTitle: crystal structure of kynurenine aminotransferase ii complex with2 alpha-ketoglutarate
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   191........200......... 210.........220.........230.........240.........250......
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Query Sequence  LDHTGPHLEAEEYIARTFG. . . . . . . . . . . . . . AEQSYIVTNGTSTSNKIVGMYAAPSGSTLLIDRNCHKSLAHLLMMND
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Template Sequence  YSPSAGIPELLSWLKQLQIKLHNPPTIHYPPSQGQMDLCVTSGSQQGLCKVFEMIINPGDNVLLDEPAYSGTLQSLHPLG
Template Known Secondary structure 


TT

T

TTTTS
GGGT
SS

TT
SS

GGGT
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   74.....80.........90.........100.........110.........120.........130.........140.........150...
 
   257..260.........270.........280.........290.... .....300.... .....310. ........320....
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Query Sequence  VVPVWLKPTRNALGILGGIPRREFTRDSIEEKVAATTQ. . . . . . . AQWPVHAVIT. . . . NSTYDGL. LYNTDWIKQTLDV
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Template Sequence  CNIINVASD. . . . . . . . . . . ESGIVPDSLRDILSRWKPEDAKNPQKNTPKFLYTVPNGNNPTGNSLTSERKKEIYELARK
Template Known Secondary structure 

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TTS
GGGGS
GGG


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   154.....160.. .......170.........180.........190.........200.........210.........220..
 
   325. ...330.........340.........350.........360.........370.........380.........390.........400..
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Query Sequence  PS. . IHFDSAWVPYTHFHPIYQGKSGMSGERVAGKVIFETQSTHKMLAALSQASLIHIKGEYDEEAFNEAFMMHTTTSPS
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Template Sequence  YDFLIIEDDPY. YFLQFN. . . KFRVPTFLSMDVDGRVIRADSFSIISSGLRIGFLTGPKP. . LIERVILHIQVSTLHPST
Template Known Secondary structure  T

TT.TT
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SGGG
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STT

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   223......230... ...... 240.........250.........260.........270........ .280.........290......
 
   403......410.........420.........430.........440.........450.........460.........470.........480..
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Query Sequence  YPIVASVETAAAMLRGNPGKRLINRSVERALHFRKEVQRLREESDGWFFDIWQPPQVDEAECWPVAPGEQWHGFNDADAD
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Template Sequence  FNQLMISQLLHEWGEEG. FMAHVDRVIDFYSNQKDAILAAADKWLTGLAEWHVPA. . . . . . . . . . . . . . . . . . . . . . . . .
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.BTT


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   298.300.........310.... .....320.........330.........340.........350.
 
   483......490.........500.........510.........520...... ...530.........540.........550...
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Query Sequence  HMFLDPVKVTILTPGMDEQGNMSEEGIPAALVAKFLDERGIVVE. . . . . . . . . KTGPYNLLFLFSIGIDKTKAMGLLRGL
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Template Sequence  . . . . AGMFLWIKVKGI. . . . . . . . . NDVKELIEEKAVKMGVLMLPGNAFYVDSSAPSPYLRASFS. SASPEQMDVAFQVL
Template Known Secondary structure  ....BSSTT
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STTT


GGGGSSSTTS



S.S

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   352.......360... ......370.........380.........390.........400... ......410.......
 
   554.....560
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Query Sequence  TEFKRSY
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Template Conservation     
 
 
Template Sequence  AQLIKES
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   418.420....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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