Job Description P52095 Confidence 92.61% Date Thu Jan 5 12:05:15 GMT 2012
Rank 310 Aligned Residues 104
% Identity 8% Template c3cg0A_
PDB info
PDB header: lyaseChain: A: PDB Molecule: response regulator receiver modulated diguanylate cyclase
PDBTitle: crystal structure of signal receiver domain of modulated diguanylate2 cyclase from desulfovibrio desulfuricans g20, an example of alternate3 folding
Resolution 2.15 Å
Show / Hide SS confidence
Show / Hide Conservation and Alignment quality
   
19 20 . . . . . . . . . 30 . . . .
. . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . .
. . . . . . 70 . . . . . . . . . 80 . . . . . . . . . 90 . . .
Predicted Secondary structure  
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Query SS confidence  
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Query Sequence  
I K E L E S A L V A Q G F Q I I .
W P Q N S V D L L K F I E H N P R I C G V I F D W D E Y S .
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L D L C S D I N Q L N E Y L P L Y A F I N T H S T M D V S V
Query Conservation  
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Alig confidence  
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Template Conservation  
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Template Sequence  
A A T L R I Q L E S L G Y D V L G V F D N G E E A V R C A P D L .
R P D I A L V D I M L C G A L D G V E T A A R L A A .
G C N L P I I F I T S S Q D V E T F Q R
Template Known Secondary structure  
T S S . S S S S S S . S
Template Predicted Secondary structure  
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Template SS confidence  
   
20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 .
. . . . . . . . 60 . . . . . . . . . 70 . . . . . . .
. . 80 . . . . . . . . . 90 . . . . . . .
 
   
94 . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . .
Predicted Secondary structure  
Query SS confidence  
Query Sequence  
Q D M R M A L W F F E Y A L G Q A E D I A I R M R Q Y T D E Y L
Query Conservation  
                                                           
Alig confidence  
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Template Conservation  
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Template Sequence  
A K R V N P F G Y L A K P V A A D T L H R S .
I E M A I H K K K
Template Known Secondary structure  
T T S S S .
Template Predicted Secondary structure  
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Template SS confidence  
   
98 . 100 . . . . . . . . . 110 . . . . . . . . .
120 . . . . . . . .
 
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf ] [Import into BibTeX ]