Job Description P52095 Confidence 98.86% Date Thu Jan 5 12:05:15 GMT 2012 Rank 234 Aligned Residues 286 % Identity 12% Template c3bwnF_ PDB info PDB header:transferase Chain: F: PDB Molecule:l-tryptophan aminotransferase; PDBTitle: l-tryptophan aminotransferase Resolution 2.25 Å

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		198	.	200	.	.	.	.	.	.	.	.	.								210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.					.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.
Predicted Secondary structure														.	.	.	.	.	.	.																													.	.	.	.
Query SS confidence														.	.	.	.	.	.	.																													.	.	.	.
Query Sequence		L	E	A	E	E	Y	I	A	R	T	F	G	.	.	.	.	.	.	.	A	E	Q	S	Y	I	V	T	N	G	T	S	T	S	N	K	I	V	G	M	Y	A	A	P	S	G	S	T	.	.	.	.	L	L	I	D	R	N	C	H	K	S	L	A	H	L	L	M	M	N	D	V	V	P	V	W	L	K	P	T	R
Query Conservation														.	.	.	.	.	.	.																													.	.	.	.
Alig confidence														.	.	.	.	.	.	.																													.	.	.	.
Template Conservation
Template Sequence		P	E	L	E	D	A	I	K	D	L	H	G	V	V	G	N	A	A	T	E	D	R	Y	I	V	V	G	T	G	S	T	Q	L	C	Q	A	A	V	H	A	L	S	S	L	A	R	S	Q	P	V	S	V	V	A	A	A	P	F	Y	S	T	Y	V	E	E	T	T	Y	V	R	S	G	M	Y	K	W	E	G	D	A
Template Known Secondary structure																	S	B			T	T	S																							S	S	S	S	S							S	S											T	T			T	T							S
Template Predicted Secondary structure
Template SS confidence
		71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
		267	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.		.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.
Predicted Secondary structure																																										.
Query SS confidence																																										.
Query Sequence		N	A	L	G	I	L	G	G	I	P	R	R	E	F	T	R	D	S	I	E	E	K	V	A	A	T	T	Q	A	Q	W	P	V	H	A	V	I	T	N	S	.	T	Y	D	G	L	L	Y	N	T	D	W	I	K	Q	T	L	D	V	P	S	I	H	F	D	S	A	W	V	P	Y	T	H	F	H	P	I	Y	Q	G
Query Conservation																																										.
Alig confidence					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.									.	.	.	.	.	.	.															.							.	.	.
Template Conservation					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.															.							.	.	.
Template Sequence		W	G	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	K	K	G	P	Y	I	E	L	V	T	S	P	N	N	P	D	G	T	I	R	E	.	.	.	.	.	.	.	T	V	V	A	K	V	I	H	D	F	A	Y	Y	W	.	P	H	Y	T	P	I	.	.	.
Template Known Secondary structure		T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			S	S								S	S		T	T	T						.	.	.	.	.	.	.											T	T		S	.	T	T	T	S			.	.	.
Template Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.															.							.	.	.
Template SS confidence
		151	.	.																									.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.								.	.	.	.	180	.	.	.	.	.	.	.	.	.		190	.	.	.	.	.
		346	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370		.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.					.	420
Predicted Secondary structure																											.																																																	.	.	.	.
Query SS confidence																											.																																																	.	.	.	.
Query Sequence		K	S	G	M	S	G	E	R	V	A	G	K	V	I	F	E	T	Q	S	T	H	K	M	L	A	.	A	L	S	Q	A	S	L	I	H	I	K	G	E	Y	D	E	E	A	F	N	E	A	F	M	M	H	T	T	T	S	P	S	Y	P	I	V	A	S	V	E	T	A	A	A	M	L	R	G	.	.	.	.	N	P
Query Conservation																											.																																																	.	.	.	.
Alig confidence		.	.	.	.	.	.	.																			.																																																	.	.	.	.
Template Conservation		.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	T	R	R	Q	D	H	D	I	M	L	F	T	F	S	K	I	T	G	H	A	G	S	R	I	G	W	A	L	V	K	D	K	E	V	A	K	K	M	V	E	Y	I	I	V	N	S	I	G	V	S	K	E	S	Q	V	R	T	A	K	I	L	N	V	L	K	E	T	C	K	S	E	S	E
Template Known Secondary structure		.	.	.	.	.	.	.		S		B			S													G	G	G																									S	S																					T			S	T
Template Predicted Secondary structure		.	.	.	.	.	.	.
Template SS confidence
									203	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.
		421	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500
Predicted Secondary structure
Query SS confidence
Query Sequence		G	K	R	L	I	N	R	S	V	E	R	A	L	H	F	R	K	E	V	Q	R	L	R	E	E	S	D	G	W	F	F	D	I	W	Q	P	P	Q	V	D	E	A	E	C	W	P	V	A	P	G	E	Q	W	H	G	F	N	D	A	D	A	D	H	M	F	L	D	P	V	K	V	T	I	L	T	P	G	M	D	E
Query Conservation
Alig confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																										.	.
Template Conservation																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																										.	.
Template Sequence		S	E	N	F	F	K	Y	G	R	E	M	M	K	N	R	W	E	K	L	R	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	V	K	E	S	D	A	F	T	L	P	K	Y	P	E	A	F	C	N	Y	F	G	K	S	L	E	S	Y	P	A	F	A	W	L	G	T	K	E	E	T	D	.	.
Template Known Secondary structure		T	T	S																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				T	S	S	S												T	T	T	T								S							S	S	S			.	.
Template Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																										.	.
Template SS confidence
		276	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.																	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.
		501	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.					.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.
Predicted Secondary structure																																				.	.	.	.
Query SS confidence																																				.	.	.	.
Query Sequence		Q	G	N	M	S	E	E	G	I	P	A	A	L	V	A	K	F	L	D	E	R	G	I	V	V	E	K	T	G	P	Y	N	L	L	.	.	.	.	F	L	F	S	I	G	I	D	K	T	K	A	M	G	L	L	R	G	L	T	E	F	K
Query Conservation																																				.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.																				.		.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.																				.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	L	V	S	E	L	R	R	H	K	V	M	S	R	A	G	E	R	C	G	.	S	D	K	K	H	V	R	V	S	M	L	S	R	E	D	V	F	N	V	F	L	E	R	L	A	N	M	K
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.							T	T	T						T	G	G	G	T	.	S		T	T						S		S															T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.																				.
Template SS confidence
															338	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.		.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions