Job Description P52095 Confidence 93.34% Date Thu Jan 5 12:05:15 GMT 2012 Rank 304 Aligned Residues 97 % Identity 14% Template c3b2nA_ PDB info PDB header:transcription Chain: A: PDB Molecule:uncharacterized protein q99uf4; PDBTitle: crystal structure of dna-binding response regulator, luxr family, from2 staphylococcus aureus Resolution 2.04 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		19	20	.	.	.	.	.	.	.	.	.	30		.	.	.	.		.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.				.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
Predicted Secondary structure														.					.																														.	.	.
Query SS confidence														.					.																														.	.	.
Query Sequence		I	K	E	L	E	S	A	L	V	A	Q	G	.	F	Q	I	I	.	W	P	Q	N	S	V	D	L	L	K	F	I	E	H	N	P	R	I	C	G	V	I	F	D	W	D	E	Y	S	.	.	.	L	D	L	C	S	D	I	N	Q	L	N	E	Y	L	P	L	Y	A	F	I	N	T	H	S	T	M	D	V	S	V
Query Conservation														.					.																														.	.	.
Alig confidence														.					.																.														.	.	.
Template Conservation																																			.
Template Sequence		R	Q	A	M	V	Q	L	I	K	L	H	G	D	F	E	I	L	A	D	T	D	N	G	L	D	A	M	K	L	I	E	E	Y	.	N	P	N	V	V	I	L	D	I	E	M	P	G	M	T	G	L	E	V	L	A	E	I	R	K	K	H	L	N	I	K	V	I	I	V	T	T	F	K	R	P	G	Y	F	E	K
Template Known Secondary structure													S	S								S													.			S						S	S		S	S	S												T	T		S								S
Template Predicted Secondary structure																																			.
Template SS confidence
		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.		.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	D	M	R	M	A	L	W	F	F	E	Y	A	L	G	Q	A	E	D	I	A	I	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	V	V	N	D	V	D	A	Y	V	L	K	E	R	S	I	E	E	L	V	E	T	I
Template Known Secondary structure					T	T		S					T	T	S
Template Predicted Secondary structure
Template SS confidence
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions