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Job DescriptionP52095
Confidence99.84%DateThu Jan 5 12:05:15 GMT 2012
Rank47Aligned Residues300
% Identity15%Templatec3a2bA_
PDB info PDB header:transferaseChain: A: PDB Molecule:serine palmitoyltransferase; PDBTitle: crystal structure of serine palmitoyltransferase from sphingobacterium2 multivorum with substrate l-serine
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   190.........200.........210.........220.........230.........240.........250.........260.........
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Query Sequence  LLDHTGPHLEAEEYIARTFGAEQSYIVTNGTSTSNKIVGMYAAPSGSTLLIDRNCHKSLAHLLMMNDVVPVWLKPTRNAL
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Template Sequence  LNGTLDIHVELEEKLSAYVGKEAAILFSTG. FQSNLGPLSCLMGRNDYILLDERDHASIIDGSRLSFSKVIKYGHN. . . .
Template Known Secondary structure  TT


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   270.........280.........290.........300.........310.........320...... ...330.........340.......
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Query Sequence  GILGGIPRREFTRDSIEEKVAATTQAQWPVHAVITNSTYDGLLYNTDWIKQTLDVPS. . IHFDSAWVPYTHFHPIYQGKS
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Template Sequence  . . . . . . . . . . . NMEDLRAKLSRLPEDSAKLICTDGIFSMEGDIVNLPELTSIANEFDAAVMVDDAHSLGVIGHKG. . . AG
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TS
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TTT

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   159160.........170.........180.........190.........200.........210.........220.. ..
 
   348.350.........360.........370.........380.........390.........400.........410.........420.......
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Query Sequence  GMSGERVAGKVIFETQSTHKMLAALSQASLIHIKGEYDEEAFNEAFMMHTTTSPSYPIVASVETAAAMLRGNPGKRLINR
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Template Sequence  TASHFGLNDDVDLIMGTFSKSLAS. . LGGFVAGDADVIDFLKHNARSVMFSASMTPASVASTLKALEIIQN. . EPEHIEK
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GGG
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   225....230.........240........ .250.........260.........270.........280.........290... ......300
 
   428.430.........440.........450.........460.........470.........480.........490.........500.......
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Query Sequence  SVERALHFRKEVQRLREESDGWFFDIWQPPQVDEAECWPVAPGEQWHGFNDADADHMFLDPVKVTILTPGMDEQGNMSEE
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Template Sequence  LWKNTDYAKAQLLDHGFDLGAT. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . ESPILPIFIRS. . . . . . . . . .
Template Known Secondary structure  TT

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   301........310.........320.. .......330...
 
   508.510.........520.........530 .........540.........550.........
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Query Sequence  GIPAALVAKFLDERGIVVEKTGP. . . . . . . YNLLFLFSIGIDKTKAMGLLRGLTEFKRS
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Template Sequence  NEKTFWVTKMLQDDGVFVNPVVSPAVPAEESLIRFSLMATHTYDQIDEAIEKMVKVFKQ
Template Known Secondary structure  TT

TTTS
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TT

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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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